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Cluster: HRGMv2_0705_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0705_6 HRGMv2_0705_6_119 123543 123980 + 1.E.14.1.1
TC HRGMv2_0705_6 HRGMv2_0705_6_120 123961 124653 + 2.A.122.1.4
TC HRGMv2_0705_6 HRGMv2_0705_6_121 124917 126050 - 2.A.88.3.1
pfam HRGMv2_0705_6 HRGMv2_0705_6_122 126284 126859 + HD | YfbR-like | HD_3
pfam HRGMv2_0705_6 HRGMv2_0705_6_123 126881 127792 + OTCace | OTCace_N
TC HRGMv2_0705_6 HRGMv2_0705_6_124 127934 129337 + 3.A.1.1.26
TC HRGMv2_0705_6 HRGMv2_0705_6_125 129732 130577 + 2.A.119.2.1
pfam HRGMv2_0705_6 HRGMv2_0705_6_126 130643 131695 + HTH_30 | GGDEF_2
TC HRGMv2_0705_6 HRGMv2_0705_6_127 131708 132994 + 9.B.174.1.1
NULL(UNKNOWN) HRGMv2_0705_6 HRGMv2_0705_6_128 132999 133439 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0705_6 HRGMv2_0705_6_129 133489 134271 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0705_6 HRGMv2_0705_6_130 134421 135479 + GH109
pfam HRGMv2_0705_6 HRGMv2_0705_6_131 135492 136214 + ThuA
pfam HRGMv2_0705_6 HRGMv2_0705_6_132 136225 136938 + AP_endonuc_2
CAZyme HRGMv2_0705_6 HRGMv2_0705_6_133 136948 138045 + GH179
pfam HRGMv2_0705_6 HRGMv2_0705_6_134 138059 139021 + AP_endonuc_2
TC HRGMv2_0705_6 HRGMv2_0705_6_135 139116 140339 + 2.A.45.2.6
NULL(UNKNOWN) HRGMv2_0705_6 HRGMv2_0705_6_136 140418 140549 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0705_6 HRGMv2_0705_6_137 140582 141730 - GT4
Gene ID: HRGMv2_0705_6_119
Type: TC
Location: 123543 - 123980 (+)
Gene ID: HRGMv2_0705_6_120
Type: TC
Location: 123961 - 124653 (+)
Gene ID: HRGMv2_0705_6_121
Type: TC
Location: 124917 - 126050 (-)
Gene ID: HRGMv2_0705_6_122
Type: pfam
Location: 126284 - 126859 (+)
Gene ID: HRGMv2_0705_6_123
Type: pfam
Location: 126881 - 127792 (+)
Gene ID: HRGMv2_0705_6_124
Type: TC
Location: 127934 - 129337 (+)
Gene ID: HRGMv2_0705_6_125
Type: TC
Location: 129732 - 130577 (+)
Gene ID: HRGMv2_0705_6_126
Type: pfam
Location: 130643 - 131695 (+)
Gene ID: HRGMv2_0705_6_127
Type: TC
Location: 131708 - 132994 (+)
Gene ID: HRGMv2_0705_6_128
Type:
Location: 132999 - 133439 (+)
Gene ID: HRGMv2_0705_6_129
Type: TF
Location: 133489 - 134271 (-)
Gene ID: HRGMv2_0705_6_130
Type: CAZyme
Location: 134421 - 135479 (+)
Gene ID: HRGMv2_0705_6_131
Type: pfam
Location: 135492 - 136214 (+)
Gene ID: HRGMv2_0705_6_132
Type: pfam
Location: 136225 - 136938 (+)
Gene ID: HRGMv2_0705_6_133
Type: CAZyme
Location: 136948 - 138045 (+)
Gene ID: HRGMv2_0705_6_134
Type: pfam
Location: 138059 - 139021 (+)
Gene ID: HRGMv2_0705_6_135
Type: TC
Location: 139116 - 140339 (+)
Gene ID: HRGMv2_0705_6_136
Type:
Location: 140418 - 140549 (+)
Gene ID: HRGMv2_0705_6_137
Type: CAZyme
Location: 140582 - 141730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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