Cluster: HRGMv2_0705_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0705
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0705_6 | HRGMv2_0705_6_103 | 109063 | 111066 | + | GH3 |
| pfam | HRGMv2_0705_6 | HRGMv2_0705_6_104 | 111165 | 111749 | - | Pentapeptide | Pentapeptide | Pentapeptide_3 | Pentapeptide_4 | Pentapeptide_4 |
| TF | HRGMv2_0705_6 | HRGMv2_0705_6_105 | 111924 | 112364 | + | MarR |
| TC | HRGMv2_0705_6 | HRGMv2_0705_6_106 | 112415 | 114160 | + | 3.A.1.135.5 |
| TC | HRGMv2_0705_6 | HRGMv2_0705_6_107 | 114153 | 116066 | + | 3.A.1.135.5 |
| TC | HRGMv2_0705_6 | HRGMv2_0705_6_108 | 116162 | 117751 | + | 2.A.49.5.5 |
Gene ID: HRGMv2_0705_6_103
Type: CAZyme
Location: 109063 - 111066 (+)
Type: CAZyme
Location: 109063 - 111066 (+)
Gene ID: HRGMv2_0705_6_104
Type: pfam
Location: 111165 - 111749 (-)
Type: pfam
Location: 111165 - 111749 (-)
Gene ID: HRGMv2_0705_6_105
Type: TF
Location: 111924 - 112364 (+)
Type: TF
Location: 111924 - 112364 (+)
Gene ID: HRGMv2_0705_6_106
Type: TC
Location: 112415 - 114160 (+)
Type: TC
Location: 112415 - 114160 (+)
Gene ID: HRGMv2_0705_6_107
Type: TC
Location: 114153 - 116066 (+)
Type: TC
Location: 114153 - 116066 (+)
Gene ID: HRGMv2_0705_6_108
Type: TC
Location: 116162 - 117751 (+)
Type: TC
Location: 116162 - 117751 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp900545325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.