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Cluster: HRGMv2_0705_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0705_5 HRGMv2_0705_5_92 105880 107769 - GH136
CAZyme HRGMv2_0705_5 HRGMv2_0705_5_93 107773 109668 - GH136
pfam HRGMv2_0705_5 HRGMv2_0705_5_94 109665 111314 - SBP_bac_1
TC HRGMv2_0705_5 HRGMv2_0705_5_95 111332 112225 - 3.A.1.1.29
TC HRGMv2_0705_5 HRGMv2_0705_5_96 112225 113178 - 3.A.1.1.10
TF HRGMv2_0705_5 HRGMv2_0705_5_97 113260 114021 - HTH_AraC | HTH_AraC
TC HRGMv2_0705_5 HRGMv2_0705_5_98 114014 115750 - 8.A.59.2.1
Gene ID: HRGMv2_0705_5_92
Type: CAZyme
Location: 105880 - 107769 (-)
Gene ID: HRGMv2_0705_5_93
Type: CAZyme
Location: 107773 - 109668 (-)
Gene ID: HRGMv2_0705_5_94
Type: pfam
Location: 109665 - 111314 (-)
Gene ID: HRGMv2_0705_5_95
Type: TC
Location: 111332 - 112225 (-)
Gene ID: HRGMv2_0705_5_96
Type: TC
Location: 112225 - 113178 (-)
Gene ID: HRGMv2_0705_5_97
Type: TF
Location: 113260 - 114021 (-)
Gene ID: HRGMv2_0705_5_98
Type: TC
Location: 114014 - 115750 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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