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Cluster: HRGMv2_0705_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0705_4 HRGMv2_0705_4_64 82946 85864 + GH38
pfam HRGMv2_0705_4 HRGMv2_0705_4_65 85901 86593 - Radical_SAM | Fer4_12
NULL(UNKNOWN) HRGMv2_0705_4 HRGMv2_0705_4_66 86869 88143 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0705_4 HRGMv2_0705_4_67 88438 91779 + CE20
pfam HRGMv2_0705_4 HRGMv2_0705_4_68 91776 94670 + Big_2
pfam HRGMv2_0705_4 HRGMv2_0705_4_69 94979 96418 + SBP_bac_1 | SBP_bac_8
TC HRGMv2_0705_4 HRGMv2_0705_4_70 96425 97324 + 3.A.1.1.20
TC HRGMv2_0705_4 HRGMv2_0705_4_71 97321 98172 + 3.A.1.1.34
Gene ID: HRGMv2_0705_4_64
Type: CAZyme
Location: 82946 - 85864 (+)
Gene ID: HRGMv2_0705_4_65
Type: pfam
Location: 85901 - 86593 (-)
Gene ID: HRGMv2_0705_4_66
Type:
Location: 86869 - 88143 (+)
Gene ID: HRGMv2_0705_4_67
Type: CAZyme
Location: 88438 - 91779 (+)
Gene ID: HRGMv2_0705_4_68
Type: pfam
Location: 91776 - 94670 (+)
Gene ID: HRGMv2_0705_4_69
Type: pfam
Location: 94979 - 96418 (+)
Gene ID: HRGMv2_0705_4_70
Type: TC
Location: 96425 - 97324 (+)
Gene ID: HRGMv2_0705_4_71
Type: TC
Location: 97321 - 98172 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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