dbCAN Logo

Cluster: HRGMv2_0705_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0705_4 HRGMv2_0705_4_11 14549 16303 + GH2
pfam HRGMv2_0705_4 HRGMv2_0705_4_12 16296 17141 + Radical_SAM | Fer4_12
pfam HRGMv2_0705_4 HRGMv2_0705_4_13 17154 19211 + Gly_radical | PFL-like
CAZyme HRGMv2_0705_4 HRGMv2_0705_4_14 19221 20696 + GH43_26
NULL(UNKNOWN) HRGMv2_0705_4 HRGMv2_0705_4_15 20708 23014 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0705_4 HRGMv2_0705_4_16 23027 24646 + SBP_bac_8 | SBP_bac_8
TC HRGMv2_0705_4 HRGMv2_0705_4_17 24649 25593 + 3.A.1.1.11
TC HRGMv2_0705_4 HRGMv2_0705_4_18 25604 26485 + 3.A.1.1.11
TF HRGMv2_0705_4 HRGMv2_0705_4_19 26641 27495 - HTH_AraC | HTH_AraC
pfam HRGMv2_0705_4 HRGMv2_0705_4_20 27680 29134 + SBP_bac_8
TC HRGMv2_0705_4 HRGMv2_0705_4_21 29223 30143 + 3.A.1.1.18
TC HRGMv2_0705_4 HRGMv2_0705_4_22 30154 31047 + 3.A.1.1.18
CAZyme HRGMv2_0705_4 HRGMv2_0705_4_23 31070 33229 + GH112
Gene ID: HRGMv2_0705_4_11
Type: CAZyme
Location: 14549 - 16303 (+)
Gene ID: HRGMv2_0705_4_12
Type: pfam
Location: 16296 - 17141 (+)
Gene ID: HRGMv2_0705_4_13
Type: pfam
Location: 17154 - 19211 (+)
Gene ID: HRGMv2_0705_4_14
Type: CAZyme
Location: 19221 - 20696 (+)
Gene ID: HRGMv2_0705_4_15
Type:
Location: 20708 - 23014 (+)
Gene ID: HRGMv2_0705_4_16
Type: pfam
Location: 23027 - 24646 (+)
Gene ID: HRGMv2_0705_4_17
Type: TC
Location: 24649 - 25593 (+)
Gene ID: HRGMv2_0705_4_18
Type: TC
Location: 25604 - 26485 (+)
Gene ID: HRGMv2_0705_4_19
Type: TF
Location: 26641 - 27495 (-)
Gene ID: HRGMv2_0705_4_20
Type: pfam
Location: 27680 - 29134 (+)
Gene ID: HRGMv2_0705_4_21
Type: TC
Location: 29223 - 30143 (+)
Gene ID: HRGMv2_0705_4_22
Type: TC
Location: 30154 - 31047 (+)
Gene ID: HRGMv2_0705_4_23
Type: CAZyme
Location: 31070 - 33229 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List