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Cluster: HRGMv2_0705_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0705_2 HRGMv2_0705_2_343 408229 409122 + 3.A.1.1.36
NULL(UNKNOWN) HRGMv2_0705_2 HRGMv2_0705_2_344 409142 412099 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0705_2 HRGMv2_0705_2_345 412113 414032 + GH163
pfam HRGMv2_0705_2 HRGMv2_0705_2_346 414052 417432 + Big_2 | Big_2
CAZyme HRGMv2_0705_2 HRGMv2_0705_2_347 417589 419337 + GH2
NULL(UNKNOWN) HRGMv2_0705_2 HRGMv2_0705_2_348 419789 420844 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0705_2 HRGMv2_0705_2_349 420870 422609 + GH2
pfam HRGMv2_0705_2 HRGMv2_0705_2_350 422696 423637 + BPD_transp_1
TC HRGMv2_0705_2 HRGMv2_0705_2_351 423652 424557 + 3.A.1.1.18
Gene ID: HRGMv2_0705_2_343
Type: TC
Location: 408229 - 409122 (+)
Gene ID: HRGMv2_0705_2_344
Type:
Location: 409142 - 412099 (+)
Gene ID: HRGMv2_0705_2_345
Type: CAZyme
Location: 412113 - 414032 (+)
Gene ID: HRGMv2_0705_2_346
Type: pfam
Location: 414052 - 417432 (+)
Gene ID: HRGMv2_0705_2_347
Type: CAZyme
Location: 417589 - 419337 (+)
Gene ID: HRGMv2_0705_2_348
Type:
Location: 419789 - 420844 (+)
Gene ID: HRGMv2_0705_2_349
Type: CAZyme
Location: 420870 - 422609 (+)
Gene ID: HRGMv2_0705_2_350
Type: pfam
Location: 422696 - 423637 (+)
Gene ID: HRGMv2_0705_2_351
Type: TC
Location: 423652 - 424557 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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