Cluster: HRGMv2_0705_CGC16
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0705
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0705_2 | HRGMv2_0705_2_319 | 367472 | 368458 | + | 3.A.1.1.23 |
| NULL(UNKNOWN) | HRGMv2_0705_2 | HRGMv2_0705_2_320 | 368474 | 371488 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_321 | 371489 | 373423 | + | GH163 |
| pfam | HRGMv2_0705_2 | HRGMv2_0705_2_322 | 373482 | 376700 | + | Big_2 | Big_2 |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_323 | 376765 | 379062 | + | CBM67 | GH78 |
| pfam | HRGMv2_0705_2 | HRGMv2_0705_2_324 | 379064 | 380368 | + | Phosphodiest |
| TC | HRGMv2_0705_2 | HRGMv2_0705_2_325 | 380365 | 381012 | + | 9.B.20.1.4 |
| pfam | HRGMv2_0705_2 | HRGMv2_0705_2_326 | 381063 | 382067 | + | Lipase_GDSL_3 |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_327 | 382072 | 383424 | + | GH1 |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_328 | 383440 | 385056 | + | GH123 |
| TF | HRGMv2_0705_2 | HRGMv2_0705_2_329 | 385103 | 385954 | - | HTH_AraC |
| TC | HRGMv2_0705_2 | HRGMv2_0705_2_330 | 386121 | 387977 | + | 3.A.1.1.29 |
| TC | HRGMv2_0705_2 | HRGMv2_0705_2_331 | 387977 | 388858 | + | 3.A.1.1.9 |
| STP | HRGMv2_0705_2 | HRGMv2_0705_2_332 | 388940 | 390580 | + | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_0705_2 | HRGMv2_0705_2_333 | 390585 | 391076 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_334 | 391133 | 392887 | + | GH136 |
| pfam | HRGMv2_0705_2 | HRGMv2_0705_2_335 | 392904 | 396707 | + | Big_2 |
| CAZyme | HRGMv2_0705_2 | HRGMv2_0705_2_336 | 396791 | 398899 | + | GH78 |
Gene ID: HRGMv2_0705_2_319
Type: TC
Location: 367472 - 368458 (+)
Type: TC
Location: 367472 - 368458 (+)
Gene ID: HRGMv2_0705_2_320
Type:
Location: 368474 - 371488 (+)
Type:
Location: 368474 - 371488 (+)
Gene ID: HRGMv2_0705_2_321
Type: CAZyme
Location: 371489 - 373423 (+)
Type: CAZyme
Location: 371489 - 373423 (+)
Gene ID: HRGMv2_0705_2_322
Type: pfam
Location: 373482 - 376700 (+)
Type: pfam
Location: 373482 - 376700 (+)
Gene ID: HRGMv2_0705_2_323
Type: CAZyme
Location: 376765 - 379062 (+)
Type: CAZyme
Location: 376765 - 379062 (+)
Gene ID: HRGMv2_0705_2_324
Type: pfam
Location: 379064 - 380368 (+)
Type: pfam
Location: 379064 - 380368 (+)
Gene ID: HRGMv2_0705_2_325
Type: TC
Location: 380365 - 381012 (+)
Type: TC
Location: 380365 - 381012 (+)
Gene ID: HRGMv2_0705_2_326
Type: pfam
Location: 381063 - 382067 (+)
Type: pfam
Location: 381063 - 382067 (+)
Gene ID: HRGMv2_0705_2_327
Type: CAZyme
Location: 382072 - 383424 (+)
Type: CAZyme
Location: 382072 - 383424 (+)
Gene ID: HRGMv2_0705_2_328
Type: CAZyme
Location: 383440 - 385056 (+)
Type: CAZyme
Location: 383440 - 385056 (+)
Gene ID: HRGMv2_0705_2_329
Type: TF
Location: 385103 - 385954 (-)
Type: TF
Location: 385103 - 385954 (-)
Gene ID: HRGMv2_0705_2_330
Type: TC
Location: 386121 - 387977 (+)
Type: TC
Location: 386121 - 387977 (+)
Gene ID: HRGMv2_0705_2_331
Type: TC
Location: 387977 - 388858 (+)
Type: TC
Location: 387977 - 388858 (+)
Gene ID: HRGMv2_0705_2_332
Type: STP
Location: 388940 - 390580 (+)
Type: STP
Location: 388940 - 390580 (+)
Gene ID: HRGMv2_0705_2_333
Type:
Location: 390585 - 391076 (+)
Type:
Location: 390585 - 391076 (+)
Gene ID: HRGMv2_0705_2_334
Type: CAZyme
Location: 391133 - 392887 (+)
Type: CAZyme
Location: 391133 - 392887 (+)
Gene ID: HRGMv2_0705_2_335
Type: pfam
Location: 392904 - 396707 (+)
Type: pfam
Location: 392904 - 396707 (+)
Gene ID: HRGMv2_0705_2_336
Type: CAZyme
Location: 396791 - 398899 (+)
Type: CAZyme
Location: 396791 - 398899 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp900545325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.