Cluster: HRGMv2_0705_CGC1
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: HRGMv2_0705
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_13 | 9406 | 11913 | - | GH39 |
| TC | HRGMv2_0705_1 | HRGMv2_0705_1_14 | 12119 | 13762 | + | 3.A.1.2.20 |
| TC | HRGMv2_0705_1 | HRGMv2_0705_1_15 | 13773 | 14780 | + | 3.A.1.2.20 |
| NULL(UNKNOWN) | HRGMv2_0705_1 | HRGMv2_0705_1_16 | 14808 | 16016 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0705_1 | HRGMv2_0705_1_17 | 16086 | 17090 | + | BPD_transp_2 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_18 | 17097 | 18812 | + | GH3 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_19 | 18809 | 19570 | + | CE1 |
| pfam | HRGMv2_0705_1 | HRGMv2_0705_1_20 | 19572 | 20210 | + | Hydrolase | HAD_2 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_21 | 20559 | 24074 | + | CBM66 | GH32 |
| TF | HRGMv2_0705_1 | HRGMv2_0705_1_22 | 24076 | 25044 | + | LacI |
| TC | HRGMv2_0705_1 | HRGMv2_0705_1_23 | 25058 | 26374 | + | 3.A.1.1.20 |
| TC | HRGMv2_0705_1 | HRGMv2_0705_1_24 | 26390 | 27373 | + | 3.A.1.1.20 |
| TC | HRGMv2_0705_1 | HRGMv2_0705_1_25 | 27375 | 28259 | + | 3.A.1.1.20 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_26 | 28273 | 30741 | + | GH32 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_27 | 30754 | 32634 | + | CBM38 | CBM38 | CBM38 |
| NULL(UNKNOWN) | HRGMv2_0705_1 | HRGMv2_0705_1_28 | 32648 | 32785 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_29 | 32798 | 34636 | + | CBM38 |
| CAZyme | HRGMv2_0705_1 | HRGMv2_0705_1_30 | 34692 | 36050 | + | GH32 |
Gene ID: HRGMv2_0705_1_13
Type: CAZyme
Location: 9406 - 11913 (-)
Type: CAZyme
Location: 9406 - 11913 (-)
Gene ID: HRGMv2_0705_1_14
Type: TC
Location: 12119 - 13762 (+)
Type: TC
Location: 12119 - 13762 (+)
Gene ID: HRGMv2_0705_1_15
Type: TC
Location: 13773 - 14780 (+)
Type: TC
Location: 13773 - 14780 (+)
Gene ID: HRGMv2_0705_1_16
Type:
Location: 14808 - 16016 (+)
Type:
Location: 14808 - 16016 (+)
Gene ID: HRGMv2_0705_1_17
Type: pfam
Location: 16086 - 17090 (+)
Type: pfam
Location: 16086 - 17090 (+)
Gene ID: HRGMv2_0705_1_18
Type: CAZyme
Location: 17097 - 18812 (+)
Type: CAZyme
Location: 17097 - 18812 (+)
Gene ID: HRGMv2_0705_1_19
Type: CAZyme
Location: 18809 - 19570 (+)
Type: CAZyme
Location: 18809 - 19570 (+)
Gene ID: HRGMv2_0705_1_20
Type: pfam
Location: 19572 - 20210 (+)
Type: pfam
Location: 19572 - 20210 (+)
Gene ID: HRGMv2_0705_1_21
Type: CAZyme
Location: 20559 - 24074 (+)
Type: CAZyme
Location: 20559 - 24074 (+)
Gene ID: HRGMv2_0705_1_22
Type: TF
Location: 24076 - 25044 (+)
Type: TF
Location: 24076 - 25044 (+)
Gene ID: HRGMv2_0705_1_23
Type: TC
Location: 25058 - 26374 (+)
Type: TC
Location: 25058 - 26374 (+)
Gene ID: HRGMv2_0705_1_24
Type: TC
Location: 26390 - 27373 (+)
Type: TC
Location: 26390 - 27373 (+)
Gene ID: HRGMv2_0705_1_25
Type: TC
Location: 27375 - 28259 (+)
Type: TC
Location: 27375 - 28259 (+)
Gene ID: HRGMv2_0705_1_26
Type: CAZyme
Location: 28273 - 30741 (+)
Type: CAZyme
Location: 28273 - 30741 (+)
Gene ID: HRGMv2_0705_1_27
Type: CAZyme
Location: 30754 - 32634 (+)
Type: CAZyme
Location: 30754 - 32634 (+)
Gene ID: HRGMv2_0705_1_28
Type:
Location: 32648 - 32785 (+)
Type:
Location: 32648 - 32785 (+)
Gene ID: HRGMv2_0705_1_29
Type: CAZyme
Location: 32798 - 34636 (+)
Type: CAZyme
Location: 32798 - 34636 (+)
Gene ID: HRGMv2_0705_1_30
Type: CAZyme
Location: 34692 - 36050 (+)
Type: CAZyme
Location: 34692 - 36050 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UMGS775
Species
UMGS775 sp900545325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.