Cluster: HRGMv2_0702_CGC7
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0702
- CGC Family ID: CGCFAM_03745
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0702_4 | HRGMv2_0702_4_45 | 48232 | 49899 | + | 2.A.21.9.2 |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_46 | 49896 | 50672 | + | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | HRGMv2_0702_4 | HRGMv2_0702_4_47 | 50864 | 52756 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_48 | 52757 | 53953 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_49 | 53966 | 55081 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0702_4 | HRGMv2_0702_4_50 | 55978 | 57402 | + | GT5 |
| CAZyme | HRGMv2_0702_4 | HRGMv2_0702_4_51 | 57509 | 59938 | + | GT35 |
| NULL(UNKNOWN) | HRGMv2_0702_4 | HRGMv2_0702_4_52 | 60347 | 60718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0702_4 | HRGMv2_0702_4_53 | 61096 | 62868 | + | GH13_39 |
| TC | HRGMv2_0702_4 | HRGMv2_0702_4_54 | 63037 | 65061 | - | 2.A.1.2.88 |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_55 | 65280 | 65558 | - | GIY-YIG | T5orf172 |
| TC | HRGMv2_0702_4 | HRGMv2_0702_4_56 | 65735 | 66337 | - | 2.A.51.1.6 |
| TC | HRGMv2_0702_4 | HRGMv2_0702_4_57 | 66334 | 67101 | - | 2.A.51.1.6 |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_58 | 67196 | 67891 | + | Radical_SAM | Fer4_12 |
| pfam | HRGMv2_0702_4 | HRGMv2_0702_4_59 | 68229 | 68822 | - | Rubrerythrin | Rubrerythrin | RUBY_RBDX |
| TC | HRGMv2_0702_4 | HRGMv2_0702_4_60 | 69015 | 69824 | + | 3.A.1.132.3 |
Gene ID: HRGMv2_0702_4_45
Type: TC
Location: 48232 - 49899 (+)
Type: TC
Location: 48232 - 49899 (+)
Gene ID: HRGMv2_0702_4_46
Type: pfam
Location: 49896 - 50672 (+)
Type: pfam
Location: 49896 - 50672 (+)
Gene ID: HRGMv2_0702_4_47
Type: CAZyme
Location: 50864 - 52756 (+)
Type: CAZyme
Location: 50864 - 52756 (+)
Gene ID: HRGMv2_0702_4_48
Type: pfam
Location: 52757 - 53953 (+)
Type: pfam
Location: 52757 - 53953 (+)
Gene ID: HRGMv2_0702_4_49
Type: pfam
Location: 53966 - 55081 (+)
Type: pfam
Location: 53966 - 55081 (+)
Gene ID: HRGMv2_0702_4_50
Type: CAZyme
Location: 55978 - 57402 (+)
Type: CAZyme
Location: 55978 - 57402 (+)
Gene ID: HRGMv2_0702_4_51
Type: CAZyme
Location: 57509 - 59938 (+)
Type: CAZyme
Location: 57509 - 59938 (+)
Gene ID: HRGMv2_0702_4_52
Type:
Location: 60347 - 60718 (-)
Type:
Location: 60347 - 60718 (-)
Gene ID: HRGMv2_0702_4_53
Type: CAZyme
Location: 61096 - 62868 (+)
Type: CAZyme
Location: 61096 - 62868 (+)
Gene ID: HRGMv2_0702_4_54
Type: TC
Location: 63037 - 65061 (-)
Type: TC
Location: 63037 - 65061 (-)
Gene ID: HRGMv2_0702_4_55
Type: pfam
Location: 65280 - 65558 (-)
Type: pfam
Location: 65280 - 65558 (-)
Gene ID: HRGMv2_0702_4_56
Type: TC
Location: 65735 - 66337 (-)
Type: TC
Location: 65735 - 66337 (-)
Gene ID: HRGMv2_0702_4_57
Type: TC
Location: 66334 - 67101 (-)
Type: TC
Location: 66334 - 67101 (-)
Gene ID: HRGMv2_0702_4_58
Type: pfam
Location: 67196 - 67891 (+)
Type: pfam
Location: 67196 - 67891 (+)
Gene ID: HRGMv2_0702_4_59
Type: pfam
Location: 68229 - 68822 (-)
Type: pfam
Location: 68229 - 68822 (-)
Gene ID: HRGMv2_0702_4_60
Type: TC
Location: 69015 - 69824 (+)
Type: TC
Location: 69015 - 69824 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp934233745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.