Cluster: HRGMv2_0702_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0702
- CGC Family ID: CGCFAM_04463
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0702_1 | HRGMv2_0702_1_196 | 230415 | 232121 | + | GT2 |
| CAZyme | HRGMv2_0702_1 | HRGMv2_0702_1_197 | 232129 | 233238 | + | GT4 |
| CAZyme | HRGMv2_0702_1 | HRGMv2_0702_1_198 | 233235 | 234143 | + | GT111 |
| TC | HRGMv2_0702_1 | HRGMv2_0702_1_199 | 234222 | 235103 | - | 3.A.1.103.5 |
| pfam | HRGMv2_0702_1 | HRGMv2_0702_1_200 | 235116 | 235946 | - | ABC2_membrane |
| pfam | HRGMv2_0702_1 | HRGMv2_0702_1_201 | 236060 | 236989 | - | DAGK_cat |
| TC | HRGMv2_0702_1 | HRGMv2_0702_1_202 | 237166 | 237897 | + | 9.B.18.1.2 |
Gene ID: HRGMv2_0702_1_196
Type: CAZyme
Location: 230415 - 232121 (+)
Type: CAZyme
Location: 230415 - 232121 (+)
Gene ID: HRGMv2_0702_1_197
Type: CAZyme
Location: 232129 - 233238 (+)
Type: CAZyme
Location: 232129 - 233238 (+)
Gene ID: HRGMv2_0702_1_198
Type: CAZyme
Location: 233235 - 234143 (+)
Type: CAZyme
Location: 233235 - 234143 (+)
Gene ID: HRGMv2_0702_1_199
Type: TC
Location: 234222 - 235103 (-)
Type: TC
Location: 234222 - 235103 (-)
Gene ID: HRGMv2_0702_1_200
Type: pfam
Location: 235116 - 235946 (-)
Type: pfam
Location: 235116 - 235946 (-)
Gene ID: HRGMv2_0702_1_201
Type: pfam
Location: 236060 - 236989 (-)
Type: pfam
Location: 236060 - 236989 (-)
Gene ID: HRGMv2_0702_1_202
Type: TC
Location: 237166 - 237897 (+)
Type: TC
Location: 237166 - 237897 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp934233745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.