Cluster: HRGMv2_0701_CGC2
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0701
- CGC Family ID: CGCFAM_03745
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_370 | 459565 | 461847 | + | GH2 |
| TF | HRGMv2_0701_1 | HRGMv2_0701_1_371 | 462028 | 462723 | + | Trans_reg_C |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_372 | 462710 | 464428 | + | 2.A.21.9.2 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_373 | 464425 | 465201 | + | GHMP_kinases_N |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_374 | 465394 | 467286 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_375 | 467287 | 468483 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_376 | 468496 | 469611 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_377 | 469819 | 471243 | + | GT5 |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_378 | 471339 | 473768 | + | GT35 |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_379 | 474249 | 476015 | + | GH13_39 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_380 | 476651 | 478669 | - | 2.A.1.2.88 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_381 | 478829 | 479431 | - | 2.A.51.1.6 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_382 | 479428 | 480195 | - | 2.A.51.1.6 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_383 | 480290 | 480985 | + | Radical_SAM | Fer4_12 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_384 | 481308 | 481898 | - | Rubrerythrin | RUBY_RBDX |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_385 | 482092 | 482901 | + | 3.A.1.132.3 |
Gene ID: HRGMv2_0701_1_370
Type: CAZyme
Location: 459565 - 461847 (+)
Type: CAZyme
Location: 459565 - 461847 (+)
Gene ID: HRGMv2_0701_1_371
Type: TF
Location: 462028 - 462723 (+)
Type: TF
Location: 462028 - 462723 (+)
Gene ID: HRGMv2_0701_1_372
Type: TC
Location: 462710 - 464428 (+)
Type: TC
Location: 462710 - 464428 (+)
Gene ID: HRGMv2_0701_1_373
Type: pfam
Location: 464425 - 465201 (+)
Type: pfam
Location: 464425 - 465201 (+)
Gene ID: HRGMv2_0701_1_374
Type: CAZyme
Location: 465394 - 467286 (+)
Type: CAZyme
Location: 465394 - 467286 (+)
Gene ID: HRGMv2_0701_1_375
Type: pfam
Location: 467287 - 468483 (+)
Type: pfam
Location: 467287 - 468483 (+)
Gene ID: HRGMv2_0701_1_376
Type: pfam
Location: 468496 - 469611 (+)
Type: pfam
Location: 468496 - 469611 (+)
Gene ID: HRGMv2_0701_1_377
Type: CAZyme
Location: 469819 - 471243 (+)
Type: CAZyme
Location: 469819 - 471243 (+)
Gene ID: HRGMv2_0701_1_378
Type: CAZyme
Location: 471339 - 473768 (+)
Type: CAZyme
Location: 471339 - 473768 (+)
Gene ID: HRGMv2_0701_1_379
Type: CAZyme
Location: 474249 - 476015 (+)
Type: CAZyme
Location: 474249 - 476015 (+)
Gene ID: HRGMv2_0701_1_380
Type: TC
Location: 476651 - 478669 (-)
Type: TC
Location: 476651 - 478669 (-)
Gene ID: HRGMv2_0701_1_381
Type: TC
Location: 478829 - 479431 (-)
Type: TC
Location: 478829 - 479431 (-)
Gene ID: HRGMv2_0701_1_382
Type: TC
Location: 479428 - 480195 (-)
Type: TC
Location: 479428 - 480195 (-)
Gene ID: HRGMv2_0701_1_383
Type: pfam
Location: 480290 - 480985 (+)
Type: pfam
Location: 480290 - 480985 (+)
Gene ID: HRGMv2_0701_1_384
Type: pfam
Location: 481308 - 481898 (-)
Type: pfam
Location: 481308 - 481898 (-)
Gene ID: HRGMv2_0701_1_385
Type: TC
Location: 482092 - 482901 (+)
Type: TC
Location: 482092 - 482901 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp000434435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.