Cluster: HRGMv2_0701_CGC1
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0701
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_21 | 25747 | 27636 | - | 3.A.1.1.26 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_22 | 27658 | 28293 | - | Hydrolase | Hydrolase_like | HAD_2 |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_23 | 28297 | 30372 | - | GH65 |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_24 | 30369 | 32612 | - | GH65 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_25 | 32630 | 33574 | - | 3.A.1.1.6 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_26 | 33571 | 34482 | - | 3.A.1.1.20 |
| pfam | HRGMv2_0701_1 | HRGMv2_0701_1_27 | 34490 | 35917 | - | SBP_bac_8 |
| STP | HRGMv2_0701_1 | HRGMv2_0701_1_28 | 36035 | 36973 | - | dCache_1 |
| TC | HRGMv2_0701_1 | HRGMv2_0701_1_29 | 36973 | 38676 | - | 8.A.59.2.1 |
| TF | HRGMv2_0701_1 | HRGMv2_0701_1_30 | 38636 | 39877 | - | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | HRGMv2_0701_1 | HRGMv2_0701_1_31 | 40065 | 42968 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_32 | 42999 | 45623 | - | GH28 |
| CAZyme | HRGMv2_0701_1 | HRGMv2_0701_1_33 | 45809 | 47464 | - | GH28 |
Gene ID: HRGMv2_0701_1_21
Type: TC
Location: 25747 - 27636 (-)
Type: TC
Location: 25747 - 27636 (-)
Gene ID: HRGMv2_0701_1_22
Type: pfam
Location: 27658 - 28293 (-)
Type: pfam
Location: 27658 - 28293 (-)
Gene ID: HRGMv2_0701_1_23
Type: CAZyme
Location: 28297 - 30372 (-)
Type: CAZyme
Location: 28297 - 30372 (-)
Gene ID: HRGMv2_0701_1_24
Type: CAZyme
Location: 30369 - 32612 (-)
Type: CAZyme
Location: 30369 - 32612 (-)
Gene ID: HRGMv2_0701_1_25
Type: TC
Location: 32630 - 33574 (-)
Type: TC
Location: 32630 - 33574 (-)
Gene ID: HRGMv2_0701_1_26
Type: TC
Location: 33571 - 34482 (-)
Type: TC
Location: 33571 - 34482 (-)
Gene ID: HRGMv2_0701_1_27
Type: pfam
Location: 34490 - 35917 (-)
Type: pfam
Location: 34490 - 35917 (-)
Gene ID: HRGMv2_0701_1_28
Type: STP
Location: 36035 - 36973 (-)
Type: STP
Location: 36035 - 36973 (-)
Gene ID: HRGMv2_0701_1_29
Type: TC
Location: 36973 - 38676 (-)
Type: TC
Location: 36973 - 38676 (-)
Gene ID: HRGMv2_0701_1_30
Type: TF
Location: 38636 - 39877 (-)
Type: TF
Location: 38636 - 39877 (-)
Gene ID: HRGMv2_0701_1_31
Type:
Location: 40065 - 42968 (-)
Type:
Location: 40065 - 42968 (-)
Gene ID: HRGMv2_0701_1_32
Type: CAZyme
Location: 42999 - 45623 (-)
Type: CAZyme
Location: 42999 - 45623 (-)
Gene ID: HRGMv2_0701_1_33
Type: CAZyme
Location: 45809 - 47464 (-)
Type: CAZyme
Location: 45809 - 47464 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp000434435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.