Cluster: HRGMv2_0698_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0698
- CGC Family ID: CGCFAM_00004
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0698_1 | HRGMv2_0698_1_106 | 108267 | 110309 | - | 2.A.1.2.88 |
| CAZyme | HRGMv2_0698_1 | HRGMv2_0698_1_107 | 110539 | 112311 | - | GH13_39 |
| CAZyme | HRGMv2_0698_1 | HRGMv2_0698_1_108 | 112898 | 115327 | - | GT35 |
| CAZyme | HRGMv2_0698_1 | HRGMv2_0698_1_109 | 115482 | 116906 | - | GT5 |
| pfam | HRGMv2_0698_1 | HRGMv2_0698_1_110 | 117228 | 118343 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_0698_1 | HRGMv2_0698_1_111 | 118356 | 119552 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0698_1 | HRGMv2_0698_1_112 | 119552 | 121444 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_0698_1_106
Type: TC
Location: 108267 - 110309 (-)
Type: TC
Location: 108267 - 110309 (-)
Gene ID: HRGMv2_0698_1_107
Type: CAZyme
Location: 110539 - 112311 (-)
Type: CAZyme
Location: 110539 - 112311 (-)
Gene ID: HRGMv2_0698_1_108
Type: CAZyme
Location: 112898 - 115327 (-)
Type: CAZyme
Location: 112898 - 115327 (-)
Gene ID: HRGMv2_0698_1_109
Type: CAZyme
Location: 115482 - 116906 (-)
Type: CAZyme
Location: 115482 - 116906 (-)
Gene ID: HRGMv2_0698_1_110
Type: pfam
Location: 117228 - 118343 (-)
Type: pfam
Location: 117228 - 118343 (-)
Gene ID: HRGMv2_0698_1_111
Type: pfam
Location: 118356 - 119552 (-)
Type: pfam
Location: 118356 - 119552 (-)
Gene ID: HRGMv2_0698_1_112
Type: CAZyme
Location: 119552 - 121444 (-)
Type: CAZyme
Location: 119552 - 121444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
CAG-475
Species
CAG-475 sp900548005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.