Cluster: HRGMv2_0697_CGC3
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0697
- CGC Family ID: CGCFAM_00037
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0697_2 | HRGMv2_0697_2_26 | 27813 | 29588 | - | GH78 |
| TF | HRGMv2_0697_2 | HRGMv2_0697_2_27 | 29752 | 30558 | - | HTH_3 |
| NULL(UNKNOWN) | HRGMv2_0697_2 | HRGMv2_0697_2_28 | 31095 | 31493 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0697_2 | HRGMv2_0697_2_29 | 31539 | 33467 | - | GH95 |
| CAZyme | HRGMv2_0697_2 | HRGMv2_0697_2_30 | 33690 | 35198 | - | GH77 |
| CAZyme | HRGMv2_0697_2 | HRGMv2_0697_2_31 | 35252 | 37501 | - | GT35 |
| TC | HRGMv2_0697_2 | HRGMv2_0697_2_32 | 37504 | 38361 | - | 3.A.1.1.27 |
| TC | HRGMv2_0697_2 | HRGMv2_0697_2_33 | 38361 | 39716 | - | 3.A.1.1.27 |
| pfam | HRGMv2_0697_2 | HRGMv2_0697_2_34 | 39726 | 41195 | - | SBP_bac_1 | SBP_bac_8 |
| CAZyme | HRGMv2_0697_2 | HRGMv2_0697_2_35 | 41225 | 42520 | - | GH13_20 |
Gene ID: HRGMv2_0697_2_26
Type: CAZyme
Location: 27813 - 29588 (-)
Type: CAZyme
Location: 27813 - 29588 (-)
Gene ID: HRGMv2_0697_2_27
Type: TF
Location: 29752 - 30558 (-)
Type: TF
Location: 29752 - 30558 (-)
Gene ID: HRGMv2_0697_2_28
Type:
Location: 31095 - 31493 (-)
Type:
Location: 31095 - 31493 (-)
Gene ID: HRGMv2_0697_2_29
Type: CAZyme
Location: 31539 - 33467 (-)
Type: CAZyme
Location: 31539 - 33467 (-)
Gene ID: HRGMv2_0697_2_30
Type: CAZyme
Location: 33690 - 35198 (-)
Type: CAZyme
Location: 33690 - 35198 (-)
Gene ID: HRGMv2_0697_2_31
Type: CAZyme
Location: 35252 - 37501 (-)
Type: CAZyme
Location: 35252 - 37501 (-)
Gene ID: HRGMv2_0697_2_32
Type: TC
Location: 37504 - 38361 (-)
Type: TC
Location: 37504 - 38361 (-)
Gene ID: HRGMv2_0697_2_33
Type: TC
Location: 38361 - 39716 (-)
Type: TC
Location: 38361 - 39716 (-)
Gene ID: HRGMv2_0697_2_34
Type: pfam
Location: 39726 - 41195 (-)
Type: pfam
Location: 39726 - 41195 (-)
Gene ID: HRGMv2_0697_2_35
Type: CAZyme
Location: 41225 - 42520 (-)
Type: CAZyme
Location: 41225 - 42520 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA10281
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0697_2_31 | vegetarian > vegan | 1.28267 | 0.04493 |