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Cluster: HRGMv2_0697_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0697_2 HRGMv2_0697_2_17 14824 15867 - GH117
NULL(UNKNOWN) HRGMv2_0697_2 HRGMv2_0697_2_18 16060 17361 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0697_2 HRGMv2_0697_2_19 17595 19481 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0697_2 HRGMv2_0697_2_20 19539 20396 - 3.A.1.1.11
TC HRGMv2_0697_2 HRGMv2_0697_2_21 20377 21327 - 3.A.1.1.11
Gene ID: HRGMv2_0697_2_17
Type: CAZyme
Location: 14824 - 15867 (-)
Gene ID: HRGMv2_0697_2_18
Type:
Location: 16060 - 17361 (-)
Gene ID: HRGMv2_0697_2_19
Type:
Location: 17595 - 19481 (-)
Gene ID: HRGMv2_0697_2_20
Type: TC
Location: 19539 - 20396 (-)
Gene ID: HRGMv2_0697_2_21
Type: TC
Location: 20377 - 21327 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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