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Cluster: HRGMv2_0696_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0696_9 HRGMv2_0696_9_27 26867 28375 - GH77
CAZyme HRGMv2_0696_9 HRGMv2_0696_9_28 28429 30678 - GT35
TC HRGMv2_0696_9 HRGMv2_0696_9_29 30681 31538 - 3.A.1.1.27
TC HRGMv2_0696_9 HRGMv2_0696_9_30 31538 32893 - 3.A.1.1.27
STP HRGMv2_0696_9 HRGMv2_0696_9_31 32907 34376 - SBP_bac_1
CAZyme HRGMv2_0696_9 HRGMv2_0696_9_32 34406 36046 - CBM34 | GH13_20
pfam HRGMv2_0696_9 HRGMv2_0696_9_33 36113 37783 - Flg_new
TF HRGMv2_0696_9 HRGMv2_0696_9_34 37975 39096 + LacI | LacI
CAZyme HRGMv2_0696_9 HRGMv2_0696_9_35 39137 41332 - CBM20 | GH13_2
Gene ID: HRGMv2_0696_9_27
Type: CAZyme
Location: 26867 - 28375 (-)
Gene ID: HRGMv2_0696_9_28
Type: CAZyme
Location: 28429 - 30678 (-)
Gene ID: HRGMv2_0696_9_29
Type: TC
Location: 30681 - 31538 (-)
Gene ID: HRGMv2_0696_9_30
Type: TC
Location: 31538 - 32893 (-)
Gene ID: HRGMv2_0696_9_31
Type: STP
Location: 32907 - 34376 (-)
Gene ID: HRGMv2_0696_9_32
Type: CAZyme
Location: 34406 - 36046 (-)
Gene ID: HRGMv2_0696_9_33
Type: pfam
Location: 36113 - 37783 (-)
Gene ID: HRGMv2_0696_9_34
Type: TF
Location: 37975 - 39096 (+)
Gene ID: HRGMv2_0696_9_35
Type: CAZyme
Location: 39137 - 41332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0696_9_35 vegan > omnivore 1.25023 0.01332
HRGMv2_0696_9_35 vegetarian > omnivore 1.22980 0.01678

🧭 Explore Read Mapping of CGC

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