dbCAN Logo

Cluster: HRGMv2_0696_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0696_7 HRGMv2_0696_7_45 54011 54925 + 3.A.1.1.11
TC HRGMv2_0696_7 HRGMv2_0696_7_46 54912 55763 + 3.A.1.1.20
NULL(UNKNOWN) HRGMv2_0696_7 HRGMv2_0696_7_47 55881 57890 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0696_7 HRGMv2_0696_7_48 57909 64262 + Big_2
CAZyme HRGMv2_0696_7 HRGMv2_0696_7_49 64252 68148 + GH28
pfam HRGMv2_0696_7 HRGMv2_0696_7_50 68138 70552 + Big_2 | Big_2
CAZyme HRGMv2_0696_7 HRGMv2_0696_7_51 70586 73069 + GH78
CAZyme HRGMv2_0696_7 HRGMv2_0696_7_52 73117 75894 + GH106
Gene ID: HRGMv2_0696_7_45
Type: TC
Location: 54011 - 54925 (+)
Gene ID: HRGMv2_0696_7_46
Type: TC
Location: 54912 - 55763 (+)
Gene ID: HRGMv2_0696_7_47
Type:
Location: 55881 - 57890 (+)
Gene ID: HRGMv2_0696_7_48
Type: pfam
Location: 57909 - 64262 (+)
Gene ID: HRGMv2_0696_7_49
Type: CAZyme
Location: 64252 - 68148 (+)
Gene ID: HRGMv2_0696_7_50
Type: pfam
Location: 68138 - 70552 (+)
Gene ID: HRGMv2_0696_7_51
Type: CAZyme
Location: 70586 - 73069 (+)
Gene ID: HRGMv2_0696_7_52
Type: CAZyme
Location: 73117 - 75894 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0696_7_52 vegan > omnivore 2.47866 0.01332
HRGMv2_0696_7_52 vegetarian > omnivore 2.96017 0.01678

🧭 Explore Read Mapping of CGC

← Back to Cluster List