Cluster: HRGMv2_0696_CGC14
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0696
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0696_23 | HRGMv2_0696_23_5 | 1289 | 2998 | + | 9.B.33.1.1 |
| TF | HRGMv2_0696_23 | HRGMv2_0696_23_6 | 3002 | 4156 | + | HTH_AraC |
| TC | HRGMv2_0696_23 | HRGMv2_0696_23_7 | 4324 | 5982 | + | 3.A.1.1.10 |
| TC | HRGMv2_0696_23 | HRGMv2_0696_23_8 | 5985 | 6932 | + | 3.A.1.1.9 |
| TC | HRGMv2_0696_23 | HRGMv2_0696_23_9 | 6944 | 7843 | + | 3.A.1.1.9 |
| pfam | HRGMv2_0696_23 | HRGMv2_0696_23_10 | 7848 | 9557 | + | Bmp |
| pfam | HRGMv2_0696_23 | HRGMv2_0696_23_11 | 9596 | 11134 | + | Big_2 |
| CAZyme | HRGMv2_0696_23 | HRGMv2_0696_23_12 | 11197 | 12375 | + | GH37 |
| CAZyme | HRGMv2_0696_23 | HRGMv2_0696_23_13 | 12356 | 14335 | + | GH3 |
| CAZyme | HRGMv2_0696_23 | HRGMv2_0696_23_14 | 14344 | 15861 | + | GH31_19 |
Gene ID: HRGMv2_0696_23_5
Type: TC
Location: 1289 - 2998 (+)
Type: TC
Location: 1289 - 2998 (+)
Gene ID: HRGMv2_0696_23_6
Type: TF
Location: 3002 - 4156 (+)
Type: TF
Location: 3002 - 4156 (+)
Gene ID: HRGMv2_0696_23_7
Type: TC
Location: 4324 - 5982 (+)
Type: TC
Location: 4324 - 5982 (+)
Gene ID: HRGMv2_0696_23_8
Type: TC
Location: 5985 - 6932 (+)
Type: TC
Location: 5985 - 6932 (+)
Gene ID: HRGMv2_0696_23_9
Type: TC
Location: 6944 - 7843 (+)
Type: TC
Location: 6944 - 7843 (+)
Gene ID: HRGMv2_0696_23_10
Type: pfam
Location: 7848 - 9557 (+)
Type: pfam
Location: 7848 - 9557 (+)
Gene ID: HRGMv2_0696_23_11
Type: pfam
Location: 9596 - 11134 (+)
Type: pfam
Location: 9596 - 11134 (+)
Gene ID: HRGMv2_0696_23_12
Type: CAZyme
Location: 11197 - 12375 (+)
Type: CAZyme
Location: 11197 - 12375 (+)
Gene ID: HRGMv2_0696_23_13
Type: CAZyme
Location: 12356 - 14335 (+)
Type: CAZyme
Location: 12356 - 14335 (+)
Gene ID: HRGMv2_0696_23_14
Type: CAZyme
Location: 14344 - 15861 (+)
Type: CAZyme
Location: 14344 - 15861 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA10281
Species
UBA10281 sp900548285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0696_23_5 | vegan > omnivore | 1.04761 | 0.01332 |
| HRGMv2_0696_23_5 | vegetarian > omnivore | 1.06874 | 0.01678 |
| HRGMv2_0696_23_6 | vegetarian > omnivore | 1.29902 | 0.01678 |
| HRGMv2_0696_23_7 | vegetarian > omnivore | 1.13361 | 0.01678 |
| HRGMv2_0696_23_8 | vegetarian > omnivore | 1.12458 | 0.01678 |
| HRGMv2_0696_23_9 | vegetarian > omnivore | 1.28863 | 0.01678 |
| HRGMv2_0696_23_10 | vegetarian > omnivore | 1.33414 | 0.01678 |
| HRGMv2_0696_23_13 | vegetarian > omnivore | 1.04017 | 0.01678 |
| HRGMv2_0696_23_13 | vegetarian > vegan | 1.01644 | 0.02650 |
| HRGMv2_0696_23_14 | vegetarian > omnivore | 1.19964 | 0.01678 |
| HRGMv2_0696_23_14 | vegetarian > vegan | 1.39506 | 0.02650 |