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Cluster: HRGMv2_0696_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0696_17 HRGMv2_0696_17_6 5728 8202 + 3.A.9.1.2
pfam HRGMv2_0696_17 HRGMv2_0696_17_7 8226 9017 + AP_endonuc_2
pfam HRGMv2_0696_17 HRGMv2_0696_17_8 9038 10471 + PGI
CAZyme HRGMv2_0696_17 HRGMv2_0696_17_9 10557 12419 + CBM48 | GH13_9
pfam HRGMv2_0696_17 HRGMv2_0696_17_10 12448 13638 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0696_17 HRGMv2_0696_17_11 13652 14761 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0696_17 HRGMv2_0696_17_12 14773 16602 + GT5
CAZyme HRGMv2_0696_17 HRGMv2_0696_17_13 16625 19057 + GT35
CAZyme HRGMv2_0696_17 HRGMv2_0696_17_14 19061 20866 + GH13_39
Gene ID: HRGMv2_0696_17_6
Type: TC
Location: 5728 - 8202 (+)
Gene ID: HRGMv2_0696_17_7
Type: pfam
Location: 8226 - 9017 (+)
Gene ID: HRGMv2_0696_17_8
Type: pfam
Location: 9038 - 10471 (+)
Gene ID: HRGMv2_0696_17_9
Type: CAZyme
Location: 10557 - 12419 (+)
Gene ID: HRGMv2_0696_17_10
Type: pfam
Location: 12448 - 13638 (+)
Gene ID: HRGMv2_0696_17_11
Type: pfam
Location: 13652 - 14761 (+)
Gene ID: HRGMv2_0696_17_12
Type: CAZyme
Location: 14773 - 16602 (+)
Gene ID: HRGMv2_0696_17_13
Type: CAZyme
Location: 16625 - 19057 (+)
Gene ID: HRGMv2_0696_17_14
Type: CAZyme
Location: 19061 - 20866 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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