Cluster: HRGMv2_0696_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0696
- CGC Family ID: CGCFAM_03532
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0696_16 | HRGMv2_0696_16_2 | 103 | 1707 | - | GH20 |
| CAZyme | HRGMv2_0696_16 | HRGMv2_0696_16_3 | 1716 | 3542 | - | GH146 |
| NULL(UNKNOWN) | HRGMv2_0696_16 | HRGMv2_0696_16_4 | 3672 | 6143 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0696_16 | HRGMv2_0696_16_5 | 6239 | 8401 | - | Big_2 | HL_N-beta |
| CAZyme | HRGMv2_0696_16 | HRGMv2_0696_16_6 | 8417 | 10429 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0696_16 | HRGMv2_0696_16_7 | 10443 | 13511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0696_16 | HRGMv2_0696_16_8 | 13567 | 14544 | - | 3.A.1.1.12 |
| pfam | HRGMv2_0696_16 | HRGMv2_0696_16_9 | 14563 | 15513 | - | BPD_transp_1 |
| NULL(UNKNOWN) | HRGMv2_0696_16 | HRGMv2_0696_16_10 | 15601 | 17310 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0696_16 | HRGMv2_0696_16_11 | 17706 | 18677 | - | GH130_2 |
| TF | HRGMv2_0696_16 | HRGMv2_0696_16_12 | 18866 | 19672 | + | HTH_AraC |
| pfam | HRGMv2_0696_16 | HRGMv2_0696_16_13 | 19842 | 21494 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_0696_16 | HRGMv2_0696_16_14 | 21710 | 22780 | - | GH109 |
Gene ID: HRGMv2_0696_16_2
Type: CAZyme
Location: 103 - 1707 (-)
Type: CAZyme
Location: 103 - 1707 (-)
Gene ID: HRGMv2_0696_16_3
Type: CAZyme
Location: 1716 - 3542 (-)
Type: CAZyme
Location: 1716 - 3542 (-)
Gene ID: HRGMv2_0696_16_4
Type:
Location: 3672 - 6143 (-)
Type:
Location: 3672 - 6143 (-)
Gene ID: HRGMv2_0696_16_5
Type: pfam
Location: 6239 - 8401 (-)
Type: pfam
Location: 6239 - 8401 (-)
Gene ID: HRGMv2_0696_16_6
Type: CAZyme
Location: 8417 - 10429 (-)
Type: CAZyme
Location: 8417 - 10429 (-)
Gene ID: HRGMv2_0696_16_7
Type:
Location: 10443 - 13511 (-)
Type:
Location: 10443 - 13511 (-)
Gene ID: HRGMv2_0696_16_8
Type: TC
Location: 13567 - 14544 (-)
Type: TC
Location: 13567 - 14544 (-)
Gene ID: HRGMv2_0696_16_9
Type: pfam
Location: 14563 - 15513 (-)
Type: pfam
Location: 14563 - 15513 (-)
Gene ID: HRGMv2_0696_16_10
Type:
Location: 15601 - 17310 (-)
Type:
Location: 15601 - 17310 (-)
Gene ID: HRGMv2_0696_16_11
Type: CAZyme
Location: 17706 - 18677 (-)
Type: CAZyme
Location: 17706 - 18677 (-)
Gene ID: HRGMv2_0696_16_12
Type: TF
Location: 18866 - 19672 (+)
Type: TF
Location: 18866 - 19672 (+)
Gene ID: HRGMv2_0696_16_13
Type: pfam
Location: 19842 - 21494 (+)
Type: pfam
Location: 19842 - 21494 (+)
Gene ID: HRGMv2_0696_16_14
Type: CAZyme
Location: 21710 - 22780 (-)
Type: CAZyme
Location: 21710 - 22780 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA10281
Species
UBA10281 sp900548285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.