Cluster: HRGMv2_0696_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0696
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0696_15 | HRGMv2_0696_15_29 | 29387 | 30145 | - | CE4 |
| TF | HRGMv2_0696_15 | HRGMv2_0696_15_30 | 30561 | 31094 | + | HTH_3 |
| TC | HRGMv2_0696_15 | HRGMv2_0696_15_31 | 31151 | 32653 | + | 3.A.1.11.8 |
| TC | HRGMv2_0696_15 | HRGMv2_0696_15_32 | 32655 | 33494 | + | 3.A.1.11.2 |
| TC | HRGMv2_0696_15 | HRGMv2_0696_15_33 | 33488 | 34294 | + | 3.A.1.11.2 |
| pfam | HRGMv2_0696_15 | HRGMv2_0696_15_34 | 34278 | 36041 | + | SBP_bac_6 | SBP_bac_8 |
| pfam | HRGMv2_0696_15 | HRGMv2_0696_15_35 | 36154 | 39030 | - | Lipase_GDSL | Lipase_GDSL_2 | DUF4838 |
| CAZyme | HRGMv2_0696_15 | HRGMv2_0696_15_36 | 39027 | 41084 | - | GH78 |
| TC | HRGMv2_0696_15 | HRGMv2_0696_15_37 | 41081 | 41929 | - | 3.A.1.1.18 |
| NULL(UNKNOWN) | HRGMv2_0696_15 | HRGMv2_0696_15_38 | 42014 | 44674 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0696_15 | HRGMv2_0696_15_39 | 44709 | 45671 | - | 3.A.1.1.7 |
Gene ID: HRGMv2_0696_15_29
Type: CAZyme
Location: 29387 - 30145 (-)
Type: CAZyme
Location: 29387 - 30145 (-)
Gene ID: HRGMv2_0696_15_30
Type: TF
Location: 30561 - 31094 (+)
Type: TF
Location: 30561 - 31094 (+)
Gene ID: HRGMv2_0696_15_31
Type: TC
Location: 31151 - 32653 (+)
Type: TC
Location: 31151 - 32653 (+)
Gene ID: HRGMv2_0696_15_32
Type: TC
Location: 32655 - 33494 (+)
Type: TC
Location: 32655 - 33494 (+)
Gene ID: HRGMv2_0696_15_33
Type: TC
Location: 33488 - 34294 (+)
Type: TC
Location: 33488 - 34294 (+)
Gene ID: HRGMv2_0696_15_34
Type: pfam
Location: 34278 - 36041 (+)
Type: pfam
Location: 34278 - 36041 (+)
Gene ID: HRGMv2_0696_15_35
Type: pfam
Location: 36154 - 39030 (-)
Type: pfam
Location: 36154 - 39030 (-)
Gene ID: HRGMv2_0696_15_36
Type: CAZyme
Location: 39027 - 41084 (-)
Type: CAZyme
Location: 39027 - 41084 (-)
Gene ID: HRGMv2_0696_15_37
Type: TC
Location: 41081 - 41929 (-)
Type: TC
Location: 41081 - 41929 (-)
Gene ID: HRGMv2_0696_15_38
Type:
Location: 42014 - 44674 (-)
Type:
Location: 42014 - 44674 (-)
Gene ID: HRGMv2_0696_15_39
Type: TC
Location: 44709 - 45671 (-)
Type: TC
Location: 44709 - 45671 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
UBA10281
Species
UBA10281 sp900548285
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0696_15_30 | vegan > omnivore | 2.88698 | 0.01332 |
| HRGMv2_0696_15_30 | vegetarian > omnivore | 1.35113 | 0.01678 |