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Cluster: HRGMv2_0696_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_24 32169 33422 - GH109
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_25 33497 35782 - GH94
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_26 35804 37030 - GH37
NULL(UNKNOWN) HRGMv2_0696_14 HRGMv2_0696_14_27 37072 39030 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_28 39027 40286 - GH109
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_29 40290 42800 - GH106
TC HRGMv2_0696_14 HRGMv2_0696_14_30 42848 43720 - 3.A.1.1.25
pfam HRGMv2_0696_14 HRGMv2_0696_14_31 43722 44654 - BPD_transp_1
STP HRGMv2_0696_14 HRGMv2_0696_14_32 44748 46118 - SBP_bac_1
CAZyme HRGMv2_0696_14 HRGMv2_0696_14_33 46194 50900 - CBM67
Gene ID: HRGMv2_0696_14_24
Type: CAZyme
Location: 32169 - 33422 (-)
Gene ID: HRGMv2_0696_14_25
Type: CAZyme
Location: 33497 - 35782 (-)
Gene ID: HRGMv2_0696_14_26
Type: CAZyme
Location: 35804 - 37030 (-)
Gene ID: HRGMv2_0696_14_27
Type:
Location: 37072 - 39030 (-)
Gene ID: HRGMv2_0696_14_28
Type: CAZyme
Location: 39027 - 40286 (-)
Gene ID: HRGMv2_0696_14_29
Type: CAZyme
Location: 40290 - 42800 (-)
Gene ID: HRGMv2_0696_14_30
Type: TC
Location: 42848 - 43720 (-)
Gene ID: HRGMv2_0696_14_31
Type: pfam
Location: 43722 - 44654 (-)
Gene ID: HRGMv2_0696_14_32
Type: STP
Location: 44748 - 46118 (-)
Gene ID: HRGMv2_0696_14_33
Type: CAZyme
Location: 46194 - 50900 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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