dbCAN Logo

Cluster: HRGMv2_0696_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0696_1 HRGMv2_0696_1_17 22697 23590 + GH43_24
TF HRGMv2_0696_1 HRGMv2_0696_1_18 23674 24684 + LacI
CAZyme HRGMv2_0696_1 HRGMv2_0696_1_19 24929 28021 + GH106
NULL(UNKNOWN) HRGMv2_0696_1 HRGMv2_0696_1_20 28018 30078 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0696_1 HRGMv2_0696_1_21 30095 31519 + SBP_bac_1
TC HRGMv2_0696_1 HRGMv2_0696_1_22 31537 32436 + 3.A.1.1.4
TC HRGMv2_0696_1 HRGMv2_0696_1_23 32433 33293 + 3.A.1.1.39
CAZyme HRGMv2_0696_1 HRGMv2_0696_1_24 33309 38099 + GH13_21
Gene ID: HRGMv2_0696_1_17
Type: CAZyme
Location: 22697 - 23590 (+)
Gene ID: HRGMv2_0696_1_18
Type: TF
Location: 23674 - 24684 (+)
Gene ID: HRGMv2_0696_1_19
Type: CAZyme
Location: 24929 - 28021 (+)
Gene ID: HRGMv2_0696_1_20
Type:
Location: 28018 - 30078 (+)
Gene ID: HRGMv2_0696_1_21
Type: STP
Location: 30095 - 31519 (+)
Gene ID: HRGMv2_0696_1_22
Type: TC
Location: 31537 - 32436 (+)
Gene ID: HRGMv2_0696_1_23
Type: TC
Location: 32433 - 33293 (+)
Gene ID: HRGMv2_0696_1_24
Type: CAZyme
Location: 33309 - 38099 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List