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Cluster: HRGMv2_0688_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0688_2 HRGMv2_0688_2_106 113988 114884 + 9.B.18.1.2
CAZyme HRGMv2_0688_2 HRGMv2_0688_2_107 114901 116070 + GT4
CAZyme HRGMv2_0688_2 HRGMv2_0688_2_108 116080 117234 + GT4
CAZyme HRGMv2_0688_2 HRGMv2_0688_2_109 117231 118385 + GT4
CAZyme HRGMv2_0688_2 HRGMv2_0688_2_110 118382 119482 + GT4
pfam HRGMv2_0688_2 HRGMv2_0688_2_111 119476 120561 + EpsG
CAZyme HRGMv2_0688_2 HRGMv2_0688_2_112 120572 121561 + GT2
pfam HRGMv2_0688_2 HRGMv2_0688_2_113 121558 123078 + Polysacc_synt | Polysacc_synt_3
TC HRGMv2_0688_2 HRGMv2_0688_2_114 123096 124136 + 9.B.18.2.1
Gene ID: HRGMv2_0688_2_106
Type: TC
Location: 113988 - 114884 (+)
Gene ID: HRGMv2_0688_2_107
Type: CAZyme
Location: 114901 - 116070 (+)
Gene ID: HRGMv2_0688_2_108
Type: CAZyme
Location: 116080 - 117234 (+)
Gene ID: HRGMv2_0688_2_109
Type: CAZyme
Location: 117231 - 118385 (+)
Gene ID: HRGMv2_0688_2_110
Type: CAZyme
Location: 118382 - 119482 (+)
Gene ID: HRGMv2_0688_2_111
Type: pfam
Location: 119476 - 120561 (+)
Gene ID: HRGMv2_0688_2_112
Type: CAZyme
Location: 120572 - 121561 (+)
Gene ID: HRGMv2_0688_2_113
Type: pfam
Location: 121558 - 123078 (+)
Gene ID: HRGMv2_0688_2_114
Type: TC
Location: 123096 - 124136 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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