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Cluster: HRGMv2_0688_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0688_10 HRGMv2_0688_10_26 41706 44033 + GH2
CAZyme HRGMv2_0688_10 HRGMv2_0688_10_27 44034 46514 + GH3
pfam HRGMv2_0688_10 HRGMv2_0688_10_28 46514 48277 + MFS_2
sulfatase HRGMv2_0688_10 HRGMv2_0688_10_29 48277 48987 + S1_14
CAZyme HRGMv2_0688_10 HRGMv2_0688_10_30 49012 51399 + GH3
NULL(UNKNOWN) HRGMv2_0688_10 HRGMv2_0688_10_31 51677 52294 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0688_10 HRGMv2_0688_10_32 52635 54221 + GH2
NULL(UNKNOWN) HRGMv2_0688_10 HRGMv2_0688_10_33 54426 54950 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0688_10 HRGMv2_0688_10_34 55439 56140 + 3.A.1.122.7
Gene ID: HRGMv2_0688_10_26
Type: CAZyme
Location: 41706 - 44033 (+)
Gene ID: HRGMv2_0688_10_27
Type: CAZyme
Location: 44034 - 46514 (+)
Gene ID: HRGMv2_0688_10_28
Type: pfam
Location: 46514 - 48277 (+)
Gene ID: HRGMv2_0688_10_29
Type: sulfatase
Location: 48277 - 48987 (+)
Gene ID: HRGMv2_0688_10_30
Type: CAZyme
Location: 49012 - 51399 (+)
Gene ID: HRGMv2_0688_10_31
Type:
Location: 51677 - 52294 (-)
Gene ID: HRGMv2_0688_10_32
Type: CAZyme
Location: 52635 - 54221 (+)
Gene ID: HRGMv2_0688_10_33
Type:
Location: 54426 - 54950 (+)
Gene ID: HRGMv2_0688_10_34
Type: TC
Location: 55439 - 56140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0688_10_33 vegetarian > vegan 4.56382 0.04124
HRGMv2_0688_10_34 vegan > omnivore 1.57232 0.04443

🧭 Explore Read Mapping of CGC

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