dbCAN Logo

Cluster: HRGMv2_0688_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0688_9 HRGMv2_0688_9_30 34901 35839 - GT2
TC HRGMv2_0688_9 HRGMv2_0688_9_31 35799 37295 - 2.A.66.2.23
pfam HRGMv2_0688_9 HRGMv2_0688_9_32 37292 38209 - ATPgrasp_TupA
pfam HRGMv2_0688_9 HRGMv2_0688_9_33 38235 39308 - EpsG
CAZyme HRGMv2_0688_9 HRGMv2_0688_9_34 39318 40409 - GT4
CAZyme HRGMv2_0688_9 HRGMv2_0688_9_35 40413 41450 - GT4
CAZyme HRGMv2_0688_9 HRGMv2_0688_9_36 41450 42658 - GT4
TC HRGMv2_0688_9 HRGMv2_0688_9_37 42651 44501 - 9.B.18.1.2
Gene ID: HRGMv2_0688_9_30
Type: CAZyme
Location: 34901 - 35839 (-)
Gene ID: HRGMv2_0688_9_31
Type: TC
Location: 35799 - 37295 (-)
Gene ID: HRGMv2_0688_9_32
Type: pfam
Location: 37292 - 38209 (-)
Gene ID: HRGMv2_0688_9_33
Type: pfam
Location: 38235 - 39308 (-)
Gene ID: HRGMv2_0688_9_34
Type: CAZyme
Location: 39318 - 40409 (-)
Gene ID: HRGMv2_0688_9_35
Type: CAZyme
Location: 40413 - 41450 (-)
Gene ID: HRGMv2_0688_9_36
Type: CAZyme
Location: 41450 - 42658 (-)
Gene ID: HRGMv2_0688_9_37
Type: TC
Location: 42651 - 44501 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List