dbCAN Logo

Cluster: HRGMv2_0686_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0686_2 HRGMv2_0686_2_209 271114 272085 + 9.B.18.1.3
CAZyme HRGMv2_0686_2 HRGMv2_0686_2_210 272108 272935 + GT2
pfam HRGMv2_0686_2 HRGMv2_0686_2_211 272960 273763 + LicD
NULL(UNKNOWN) HRGMv2_0686_2 HRGMv2_0686_2_212 273776 275080 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0686_2 HRGMv2_0686_2_213 275077 276318 + GT4
pfam HRGMv2_0686_2 HRGMv2_0686_2_214 276290 277567 + Wzy_C
CAZyme HRGMv2_0686_2 HRGMv2_0686_2_215 277564 278721 + GT4
NULL(UNKNOWN) HRGMv2_0686_2 HRGMv2_0686_2_216 278724 279236 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0686_2 HRGMv2_0686_2_217 279229 280551 + Polysacc_synt | Polysacc_synt_3
TC HRGMv2_0686_2 HRGMv2_0686_2_218 280588 281643 + 9.B.18.2.1
Gene ID: HRGMv2_0686_2_209
Type: TC
Location: 271114 - 272085 (+)
Gene ID: HRGMv2_0686_2_210
Type: CAZyme
Location: 272108 - 272935 (+)
Gene ID: HRGMv2_0686_2_211
Type: pfam
Location: 272960 - 273763 (+)
Gene ID: HRGMv2_0686_2_212
Type:
Location: 273776 - 275080 (+)
Gene ID: HRGMv2_0686_2_213
Type: CAZyme
Location: 275077 - 276318 (+)
Gene ID: HRGMv2_0686_2_214
Type: pfam
Location: 276290 - 277567 (+)
Gene ID: HRGMv2_0686_2_215
Type: CAZyme
Location: 277564 - 278721 (+)
Gene ID: HRGMv2_0686_2_216
Type:
Location: 278724 - 279236 (+)
Gene ID: HRGMv2_0686_2_217
Type: pfam
Location: 279229 - 280551 (+)
Gene ID: HRGMv2_0686_2_218
Type: TC
Location: 280588 - 281643 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List