Cluster: HRGMv2_0686_CGC8
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0686
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0686_2 | HRGMv2_0686_2_154 | 199533 | 201242 | + | 9.B.33.1.1 |
| TF | HRGMv2_0686_2 | HRGMv2_0686_2_155 | 201246 | 202400 | + | HTH_AraC |
| TC | HRGMv2_0686_2 | HRGMv2_0686_2_156 | 202568 | 204226 | + | 3.A.1.1.10 |
| TC | HRGMv2_0686_2 | HRGMv2_0686_2_157 | 204229 | 205176 | + | 3.A.1.1.9 |
| TC | HRGMv2_0686_2 | HRGMv2_0686_2_158 | 205188 | 206087 | + | 3.A.1.1.9 |
| pfam | HRGMv2_0686_2 | HRGMv2_0686_2_159 | 206090 | 207799 | + | Bmp |
| pfam | HRGMv2_0686_2 | HRGMv2_0686_2_160 | 207838 | 209352 | + | Big_2 |
| CAZyme | HRGMv2_0686_2 | HRGMv2_0686_2_161 | 209416 | 210594 | + | GH37 |
| CAZyme | HRGMv2_0686_2 | HRGMv2_0686_2_162 | 210575 | 212554 | + | GH3 |
| CAZyme | HRGMv2_0686_2 | HRGMv2_0686_2_163 | 212563 | 214080 | + | GH31_19 |
Gene ID: HRGMv2_0686_2_154
Type: TC
Location: 199533 - 201242 (+)
Type: TC
Location: 199533 - 201242 (+)
Gene ID: HRGMv2_0686_2_155
Type: TF
Location: 201246 - 202400 (+)
Type: TF
Location: 201246 - 202400 (+)
Gene ID: HRGMv2_0686_2_156
Type: TC
Location: 202568 - 204226 (+)
Type: TC
Location: 202568 - 204226 (+)
Gene ID: HRGMv2_0686_2_157
Type: TC
Location: 204229 - 205176 (+)
Type: TC
Location: 204229 - 205176 (+)
Gene ID: HRGMv2_0686_2_158
Type: TC
Location: 205188 - 206087 (+)
Type: TC
Location: 205188 - 206087 (+)
Gene ID: HRGMv2_0686_2_159
Type: pfam
Location: 206090 - 207799 (+)
Type: pfam
Location: 206090 - 207799 (+)
Gene ID: HRGMv2_0686_2_160
Type: pfam
Location: 207838 - 209352 (+)
Type: pfam
Location: 207838 - 209352 (+)
Gene ID: HRGMv2_0686_2_161
Type: CAZyme
Location: 209416 - 210594 (+)
Type: CAZyme
Location: 209416 - 210594 (+)
Gene ID: HRGMv2_0686_2_162
Type: CAZyme
Location: 210575 - 212554 (+)
Type: CAZyme
Location: 210575 - 212554 (+)
Gene ID: HRGMv2_0686_2_163
Type: CAZyme
Location: 212563 - 214080 (+)
Type: CAZyme
Location: 212563 - 214080 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp003448195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0686_2_155 | vegetarian > omnivore | 1.34576 | 0.00222 |
| HRGMv2_0686_2_156 | vegetarian > omnivore | 1.13223 | 0.00222 |
| HRGMv2_0686_2_157 | vegetarian > omnivore | 1.57787 | 0.00222 |
| HRGMv2_0686_2_159 | vegetarian > omnivore | 1.61774 | 0.00222 |
| HRGMv2_0686_2_162 | vegetarian > omnivore | 1.08567 | 0.00222 |
| HRGMv2_0686_2_163 | vegetarian > omnivore | 1.41430 | 0.00222 |
| HRGMv2_0686_2_163 | vegetarian > vegan | 1.23857 | 0.02650 |