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Cluster: HRGMv2_0686_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0686_1 HRGMv2_0686_1_419 507114 508607 - GH77
pfam HRGMv2_0686_1 HRGMv2_0686_1_420 508664 511258 - Flg_new
NULL(UNKNOWN) HRGMv2_0686_1 HRGMv2_0686_1_421 511313 513031 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0686_1 HRGMv2_0686_1_422 513087 515333 - GT35
TC HRGMv2_0686_1 HRGMv2_0686_1_423 515347 516201 - 3.A.1.1.27
TC HRGMv2_0686_1 HRGMv2_0686_1_424 516198 517562 - 3.A.1.1.27
STP HRGMv2_0686_1 HRGMv2_0686_1_425 517581 519050 - SBP_bac_1
CAZyme HRGMv2_0686_1 HRGMv2_0686_1_426 519047 520723 - CBM34 | GH13_20
TF HRGMv2_0686_1 HRGMv2_0686_1_427 521000 521851 + LacI
pfam HRGMv2_0686_1 HRGMv2_0686_1_428 522297 522689 - DUF3899
TC HRGMv2_0686_1 HRGMv2_0686_1_429 522692 523927 - 3.A.1.5.25
TC HRGMv2_0686_1 HRGMv2_0686_1_430 523899 526073 - 3.A.1.5.19
TC HRGMv2_0686_1 HRGMv2_0686_1_431 526127 527665 - 3.A.1.5.19
TC HRGMv2_0686_1 HRGMv2_0686_1_432 527667 528629 - 3.A.1.5.19
Gene ID: HRGMv2_0686_1_419
Type: CAZyme
Location: 507114 - 508607 (-)
Gene ID: HRGMv2_0686_1_420
Type: pfam
Location: 508664 - 511258 (-)
Gene ID: HRGMv2_0686_1_421
Type:
Location: 511313 - 513031 (-)
Gene ID: HRGMv2_0686_1_422
Type: CAZyme
Location: 513087 - 515333 (-)
Gene ID: HRGMv2_0686_1_423
Type: TC
Location: 515347 - 516201 (-)
Gene ID: HRGMv2_0686_1_424
Type: TC
Location: 516198 - 517562 (-)
Gene ID: HRGMv2_0686_1_425
Type: STP
Location: 517581 - 519050 (-)
Gene ID: HRGMv2_0686_1_426
Type: CAZyme
Location: 519047 - 520723 (-)
Gene ID: HRGMv2_0686_1_427
Type: TF
Location: 521000 - 521851 (+)
Gene ID: HRGMv2_0686_1_428
Type: pfam
Location: 522297 - 522689 (-)
Gene ID: HRGMv2_0686_1_429
Type: TC
Location: 522692 - 523927 (-)
Gene ID: HRGMv2_0686_1_430
Type: TC
Location: 523899 - 526073 (-)
Gene ID: HRGMv2_0686_1_431
Type: TC
Location: 526127 - 527665 (-)
Gene ID: HRGMv2_0686_1_432
Type: TC
Location: 527667 - 528629 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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