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Cluster: HRGMv2_0686_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0686_5 HRGMv2_0686_5_89 106144 107868 + 8.A.59.2.1
STP HRGMv2_0686_5 HRGMv2_0686_5_90 107865 108842 + Peripla_BP_1
TC HRGMv2_0686_5 HRGMv2_0686_5_91 109115 110200 + 3.A.1.2.3
TC HRGMv2_0686_5 HRGMv2_0686_5_92 110298 111800 + 3.A.1.2.3
TC HRGMv2_0686_5 HRGMv2_0686_5_93 111814 113079 + 3.A.1.2.3
TF HRGMv2_0686_5 HRGMv2_0686_5_94 113661 114749 - GntR
STP HRGMv2_0686_5 HRGMv2_0686_5_95 114988 116361 + SBP_bac_1
TC HRGMv2_0686_5 HRGMv2_0686_5_96 116361 117287 + 3.A.1.1.7
TC HRGMv2_0686_5 HRGMv2_0686_5_97 117299 118201 + 3.A.1.1.20
pfam HRGMv2_0686_5 HRGMv2_0686_5_98 118239 120626 + GxGYxYP_C | GxGYxYP_N
NULL(UNKNOWN) HRGMv2_0686_5 HRGMv2_0686_5_99 120647 123139 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_100 123220 125877 + GH38
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_101 125870 127849 + GH92
Gene ID: HRGMv2_0686_5_89
Type: TC
Location: 106144 - 107868 (+)
Gene ID: HRGMv2_0686_5_90
Type: STP
Location: 107865 - 108842 (+)
Gene ID: HRGMv2_0686_5_91
Type: TC
Location: 109115 - 110200 (+)
Gene ID: HRGMv2_0686_5_92
Type: TC
Location: 110298 - 111800 (+)
Gene ID: HRGMv2_0686_5_93
Type: TC
Location: 111814 - 113079 (+)
Gene ID: HRGMv2_0686_5_94
Type: TF
Location: 113661 - 114749 (-)
Gene ID: HRGMv2_0686_5_95
Type: STP
Location: 114988 - 116361 (+)
Gene ID: HRGMv2_0686_5_96
Type: TC
Location: 116361 - 117287 (+)
Gene ID: HRGMv2_0686_5_97
Type: TC
Location: 117299 - 118201 (+)
Gene ID: HRGMv2_0686_5_98
Type: pfam
Location: 118239 - 120626 (+)
Gene ID: HRGMv2_0686_5_99
Type:
Location: 120647 - 123139 (+)
Gene ID: HRGMv2_0686_5_100
Type: CAZyme
Location: 123220 - 125877 (+)
Gene ID: HRGMv2_0686_5_101
Type: CAZyme
Location: 125870 - 127849 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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