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Cluster: HRGMv2_0686_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_5 8590 11205 + GH43_32
pfam HRGMv2_0686_5 HRGMv2_0686_5_6 11277 12806 + SBP_bac_1
TC HRGMv2_0686_5 HRGMv2_0686_5_7 12891 13856 + 3.A.1.1.3
TC HRGMv2_0686_5 HRGMv2_0686_5_8 13870 14751 + 3.A.1.1.36
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_9 14831 16603 + GH2
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_10 16615 17577 + CE2
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_11 17687 18799 + GH5_13
CAZyme HRGMv2_0686_5 HRGMv2_0686_5_12 18796 19986 + CE2
Gene ID: HRGMv2_0686_5_5
Type: CAZyme
Location: 8590 - 11205 (+)
Gene ID: HRGMv2_0686_5_6
Type: pfam
Location: 11277 - 12806 (+)
Gene ID: HRGMv2_0686_5_7
Type: TC
Location: 12891 - 13856 (+)
Gene ID: HRGMv2_0686_5_8
Type: TC
Location: 13870 - 14751 (+)
Gene ID: HRGMv2_0686_5_9
Type: CAZyme
Location: 14831 - 16603 (+)
Gene ID: HRGMv2_0686_5_10
Type: CAZyme
Location: 16615 - 17577 (+)
Gene ID: HRGMv2_0686_5_11
Type: CAZyme
Location: 17687 - 18799 (+)
Gene ID: HRGMv2_0686_5_12
Type: CAZyme
Location: 18796 - 19986 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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