Cluster: HRGMv2_0686_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0686
- CGC Family ID: CGCFAM_01399
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0686_4 | HRGMv2_0686_4_24 | 25497 | 28166 | - | GH38 |
| TF | HRGMv2_0686_4 | HRGMv2_0686_4_25 | 28178 | 29272 | - | GntR |
| TC | HRGMv2_0686_4 | HRGMv2_0686_4_26 | 29680 | 30582 | + | 3.A.1.1.11 |
| STP | HRGMv2_0686_4 | HRGMv2_0686_4_27 | 30639 | 32051 | + | SBP_bac_1 |
| TC | HRGMv2_0686_4 | HRGMv2_0686_4_28 | 32123 | 33061 | + | 3.A.1.1.44 |
Gene ID: HRGMv2_0686_4_24
Type: CAZyme
Location: 25497 - 28166 (-)
Type: CAZyme
Location: 25497 - 28166 (-)
Gene ID: HRGMv2_0686_4_25
Type: TF
Location: 28178 - 29272 (-)
Type: TF
Location: 28178 - 29272 (-)
Gene ID: HRGMv2_0686_4_26
Type: TC
Location: 29680 - 30582 (+)
Type: TC
Location: 29680 - 30582 (+)
Gene ID: HRGMv2_0686_4_27
Type: STP
Location: 30639 - 32051 (+)
Type: STP
Location: 30639 - 32051 (+)
Gene ID: HRGMv2_0686_4_28
Type: TC
Location: 32123 - 33061 (+)
Type: TC
Location: 32123 - 33061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp003448195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.