Cluster: HRGMv2_0686_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0686
- CGC Family ID: CGCFAM_00200
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0686_3 | HRGMv2_0686_3_69 | 90420 | 91478 | - | GT28 |
| pfam | HRGMv2_0686_3 | HRGMv2_0686_3_70 | 91811 | 92680 | + | PBP_like_2 | PBP_like_2 | SBP_bac_11 |
| TC | HRGMv2_0686_3 | HRGMv2_0686_3_71 | 92830 | 93816 | + | 3.A.1.7.5 |
| TC | HRGMv2_0686_3 | HRGMv2_0686_3_72 | 93813 | 94688 | + | 3.A.1.7.2 |
| TC | HRGMv2_0686_3 | HRGMv2_0686_3_73 | 94693 | 95484 | + | 3.A.1.7.1 |
Gene ID: HRGMv2_0686_3_69
Type: CAZyme
Location: 90420 - 91478 (-)
Type: CAZyme
Location: 90420 - 91478 (-)
Gene ID: HRGMv2_0686_3_70
Type: pfam
Location: 91811 - 92680 (+)
Type: pfam
Location: 91811 - 92680 (+)
Gene ID: HRGMv2_0686_3_71
Type: TC
Location: 92830 - 93816 (+)
Type: TC
Location: 92830 - 93816 (+)
Gene ID: HRGMv2_0686_3_72
Type: TC
Location: 93813 - 94688 (+)
Type: TC
Location: 93813 - 94688 (+)
Gene ID: HRGMv2_0686_3_73
Type: TC
Location: 94693 - 95484 (+)
Type: TC
Location: 94693 - 95484 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp003448195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.