Cluster: HRGMv2_0685_CGC4
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_00292
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_226 | 244003 | 248691 | + | CBM67 |
| STP | HRGMv2_0685_1 | HRGMv2_0685_1_227 | 248753 | 250066 | + | SBP_bac_1 |
| TC | HRGMv2_0685_1 | HRGMv2_0685_1_228 | 250145 | 251071 | + | 3.A.1.1.33 |
| TC | HRGMv2_0685_1 | HRGMv2_0685_1_229 | 251068 | 251943 | + | 3.A.1.1.18 |
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_230 | 251946 | 254438 | + | GH106 |
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_231 | 254438 | 255697 | + | GH109 |
| NULL(UNKNOWN) | HRGMv2_0685_1 | HRGMv2_0685_1_232 | 255694 | 257670 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_233 | 257720 | 258946 | + | GH37 |
| NULL(UNKNOWN) | HRGMv2_0685_1 | HRGMv2_0685_1_234 | 258965 | 259306 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_235 | 259352 | 261379 | + | GH36 |
| NULL(UNKNOWN) | HRGMv2_0685_1 | HRGMv2_0685_1_236 | 261496 | 261630 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_1 | HRGMv2_0685_1_237 | 261832 | 264561 | + | CBM67 | GH78 |
Gene ID: HRGMv2_0685_1_226
Type: CAZyme
Location: 244003 - 248691 (+)
Type: CAZyme
Location: 244003 - 248691 (+)
Gene ID: HRGMv2_0685_1_227
Type: STP
Location: 248753 - 250066 (+)
Type: STP
Location: 248753 - 250066 (+)
Gene ID: HRGMv2_0685_1_228
Type: TC
Location: 250145 - 251071 (+)
Type: TC
Location: 250145 - 251071 (+)
Gene ID: HRGMv2_0685_1_229
Type: TC
Location: 251068 - 251943 (+)
Type: TC
Location: 251068 - 251943 (+)
Gene ID: HRGMv2_0685_1_230
Type: CAZyme
Location: 251946 - 254438 (+)
Type: CAZyme
Location: 251946 - 254438 (+)
Gene ID: HRGMv2_0685_1_231
Type: CAZyme
Location: 254438 - 255697 (+)
Type: CAZyme
Location: 254438 - 255697 (+)
Gene ID: HRGMv2_0685_1_232
Type:
Location: 255694 - 257670 (+)
Type:
Location: 255694 - 257670 (+)
Gene ID: HRGMv2_0685_1_233
Type: CAZyme
Location: 257720 - 258946 (+)
Type: CAZyme
Location: 257720 - 258946 (+)
Gene ID: HRGMv2_0685_1_234
Type:
Location: 258965 - 259306 (+)
Type:
Location: 258965 - 259306 (+)
Gene ID: HRGMv2_0685_1_235
Type: CAZyme
Location: 259352 - 261379 (+)
Type: CAZyme
Location: 259352 - 261379 (+)
Gene ID: HRGMv2_0685_1_236
Type:
Location: 261496 - 261630 (+)
Type:
Location: 261496 - 261630 (+)
Gene ID: HRGMv2_0685_1_237
Type: CAZyme
Location: 261832 - 264561 (+)
Type: CAZyme
Location: 261832 - 264561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.