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Cluster: HRGMv2_0685_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0685_1 HRGMv2_0685_1_141 141449 142453 + 9.B.157.1.2
NULL(UNKNOWN) HRGMv2_0685_1 HRGMv2_0685_1_142 142714 143427 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0685_1 HRGMv2_0685_1_143 143513 144100 - TetR_N
TC HRGMv2_0685_1 HRGMv2_0685_1_144 144243 145916 - 1.A.26.1.2
TC HRGMv2_0685_1 HRGMv2_0685_1_145 146282 147418 - 3.A.1.115.1
TC HRGMv2_0685_1 HRGMv2_0685_1_146 147415 148203 - 3.A.1.128.6
CAZyme HRGMv2_0685_1 HRGMv2_0685_1_147 148512 149279 + CE4
pfam HRGMv2_0685_1 HRGMv2_0685_1_148 149363 150109 + SSB
TC HRGMv2_0685_1 HRGMv2_0685_1_149 150302 151654 + 2.A.38.4.3
TC HRGMv2_0685_1 HRGMv2_0685_1_150 151685 152332 + 2.A.38.4.6
Gene ID: HRGMv2_0685_1_141
Type: TC
Location: 141449 - 142453 (+)
Gene ID: HRGMv2_0685_1_142
Type:
Location: 142714 - 143427 (-)
Gene ID: HRGMv2_0685_1_143
Type: STP
Location: 143513 - 144100 (-)
Gene ID: HRGMv2_0685_1_144
Type: TC
Location: 144243 - 145916 (-)
Gene ID: HRGMv2_0685_1_145
Type: TC
Location: 146282 - 147418 (-)
Gene ID: HRGMv2_0685_1_146
Type: TC
Location: 147415 - 148203 (-)
Gene ID: HRGMv2_0685_1_147
Type: CAZyme
Location: 148512 - 149279 (+)
Gene ID: HRGMv2_0685_1_148
Type: pfam
Location: 149363 - 150109 (+)
Gene ID: HRGMv2_0685_1_149
Type: TC
Location: 150302 - 151654 (+)
Gene ID: HRGMv2_0685_1_150
Type: TC
Location: 151685 - 152332 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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