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Cluster: HRGMv2_0685_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0685_15 HRGMv2_0685_15_1 318 1046 - 3.A.1.4.10
TC HRGMv2_0685_15 HRGMv2_0685_15_2 1048 1830 - 3.A.1.4.10
TC HRGMv2_0685_15 HRGMv2_0685_15_3 1830 3053 - 3.A.1.4.8
TC HRGMv2_0685_15 HRGMv2_0685_15_4 3055 3945 - 3.A.1.4.10
TC HRGMv2_0685_15 HRGMv2_0685_15_5 3995 5203 - 3.A.1.4.10
pfam HRGMv2_0685_15 HRGMv2_0685_15_6 5711 6808 + Metallophos
NULL(UNKNOWN) HRGMv2_0685_15 HRGMv2_0685_15_7 6813 9119 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0685_15 HRGMv2_0685_15_8 9608 11299 + 3.A.1.5.19
TC HRGMv2_0685_15 HRGMv2_0685_15_9 11483 12427 + 3.A.1.5.19
TC HRGMv2_0685_15 HRGMv2_0685_15_10 12424 13521 + 3.A.1.5.19
TC HRGMv2_0685_15 HRGMv2_0685_15_11 13564 14652 + 3.A.1.5.25
TC HRGMv2_0685_15 HRGMv2_0685_15_12 14639 15580 + 3.A.1.5.25
pfam HRGMv2_0685_15 HRGMv2_0685_15_13 15660 16409 - Spore_YunB
CAZyme HRGMv2_0685_15 HRGMv2_0685_15_14 16406 17452 - GT28
Gene ID: HRGMv2_0685_15_1
Type: TC
Location: 318 - 1046 (-)
Gene ID: HRGMv2_0685_15_2
Type: TC
Location: 1048 - 1830 (-)
Gene ID: HRGMv2_0685_15_3
Type: TC
Location: 1830 - 3053 (-)
Gene ID: HRGMv2_0685_15_4
Type: TC
Location: 3055 - 3945 (-)
Gene ID: HRGMv2_0685_15_5
Type: TC
Location: 3995 - 5203 (-)
Gene ID: HRGMv2_0685_15_6
Type: pfam
Location: 5711 - 6808 (+)
Gene ID: HRGMv2_0685_15_7
Type:
Location: 6813 - 9119 (+)
Gene ID: HRGMv2_0685_15_8
Type: TC
Location: 9608 - 11299 (+)
Gene ID: HRGMv2_0685_15_9
Type: TC
Location: 11483 - 12427 (+)
Gene ID: HRGMv2_0685_15_10
Type: TC
Location: 12424 - 13521 (+)
Gene ID: HRGMv2_0685_15_11
Type: TC
Location: 13564 - 14652 (+)
Gene ID: HRGMv2_0685_15_12
Type: TC
Location: 14639 - 15580 (+)
Gene ID: HRGMv2_0685_15_13
Type: pfam
Location: 15660 - 16409 (-)
Gene ID: HRGMv2_0685_15_14
Type: CAZyme
Location: 16406 - 17452 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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