Cluster: HRGMv2_0685_CGC25
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_01005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0685_7 | HRGMv2_0685_7_72 | 69045 | 70955 | + | CBM67 | GH78 |
| TF | HRGMv2_0685_7 | HRGMv2_0685_7_73 | 72051 | 72881 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0685_7 | HRGMv2_0685_7_74 | 73097 | 75415 | + | GH78 |
| NULL(UNKNOWN) | HRGMv2_0685_7 | HRGMv2_0685_7_75 | 75421 | 76536 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0685_7 | HRGMv2_0685_7_76 | 76564 | 79053 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0685_7 | HRGMv2_0685_7_77 | 79516 | 81225 | + | 9.B.33.1.1 |
| TF | HRGMv2_0685_7 | HRGMv2_0685_7_78 | 81229 | 82383 | + | HTH_AraC |
| TC | HRGMv2_0685_7 | HRGMv2_0685_7_79 | 82553 | 84211 | + | 3.A.1.1.10 |
| TC | HRGMv2_0685_7 | HRGMv2_0685_7_80 | 84214 | 85161 | + | 3.A.1.1.9 |
| TC | HRGMv2_0685_7 | HRGMv2_0685_7_81 | 85173 | 86072 | + | 3.A.1.1.9 |
| pfam | HRGMv2_0685_7 | HRGMv2_0685_7_82 | 86075 | 87784 | + | Bmp |
| pfam | HRGMv2_0685_7 | HRGMv2_0685_7_83 | 87823 | 89340 | + | Big_2 |
| CAZyme | HRGMv2_0685_7 | HRGMv2_0685_7_84 | 89403 | 90581 | + | GH37 |
| CAZyme | HRGMv2_0685_7 | HRGMv2_0685_7_85 | 90562 | 92541 | + | GH3 |
| CAZyme | HRGMv2_0685_7 | HRGMv2_0685_7_86 | 92550 | 94067 | + | GH31_19 |
| peptidase | HRGMv2_0685_7 | HRGMv2_0685_7_87 | 94443 | 95714 | - | M18.UPW |
| TF | HRGMv2_0685_7 | HRGMv2_0685_7_88 | 96178 | 96615 | + | MarR |
| TC | HRGMv2_0685_7 | HRGMv2_0685_7_89 | 96909 | 99713 | + | 3.A.1.122.14 |
Gene ID: HRGMv2_0685_7_72
Type: CAZyme
Location: 69045 - 70955 (+)
Type: CAZyme
Location: 69045 - 70955 (+)
Gene ID: HRGMv2_0685_7_73
Type: TF
Location: 72051 - 72881 (-)
Type: TF
Location: 72051 - 72881 (-)
Gene ID: HRGMv2_0685_7_74
Type: CAZyme
Location: 73097 - 75415 (+)
Type: CAZyme
Location: 73097 - 75415 (+)
Gene ID: HRGMv2_0685_7_75
Type:
Location: 75421 - 76536 (+)
Type:
Location: 75421 - 76536 (+)
Gene ID: HRGMv2_0685_7_76
Type:
Location: 76564 - 79053 (+)
Type:
Location: 76564 - 79053 (+)
Gene ID: HRGMv2_0685_7_77
Type: TC
Location: 79516 - 81225 (+)
Type: TC
Location: 79516 - 81225 (+)
Gene ID: HRGMv2_0685_7_78
Type: TF
Location: 81229 - 82383 (+)
Type: TF
Location: 81229 - 82383 (+)
Gene ID: HRGMv2_0685_7_79
Type: TC
Location: 82553 - 84211 (+)
Type: TC
Location: 82553 - 84211 (+)
Gene ID: HRGMv2_0685_7_80
Type: TC
Location: 84214 - 85161 (+)
Type: TC
Location: 84214 - 85161 (+)
Gene ID: HRGMv2_0685_7_81
Type: TC
Location: 85173 - 86072 (+)
Type: TC
Location: 85173 - 86072 (+)
Gene ID: HRGMv2_0685_7_82
Type: pfam
Location: 86075 - 87784 (+)
Type: pfam
Location: 86075 - 87784 (+)
Gene ID: HRGMv2_0685_7_83
Type: pfam
Location: 87823 - 89340 (+)
Type: pfam
Location: 87823 - 89340 (+)
Gene ID: HRGMv2_0685_7_84
Type: CAZyme
Location: 89403 - 90581 (+)
Type: CAZyme
Location: 89403 - 90581 (+)
Gene ID: HRGMv2_0685_7_85
Type: CAZyme
Location: 90562 - 92541 (+)
Type: CAZyme
Location: 90562 - 92541 (+)
Gene ID: HRGMv2_0685_7_86
Type: CAZyme
Location: 92550 - 94067 (+)
Type: CAZyme
Location: 92550 - 94067 (+)
Gene ID: HRGMv2_0685_7_87
Type: peptidase
Location: 94443 - 95714 (-)
Type: peptidase
Location: 94443 - 95714 (-)
Gene ID: HRGMv2_0685_7_88
Type: TF
Location: 96178 - 96615 (+)
Type: TF
Location: 96178 - 96615 (+)
Gene ID: HRGMv2_0685_7_89
Type: TC
Location: 96909 - 99713 (+)
Type: TC
Location: 96909 - 99713 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0685_7_77 | vegetarian > omnivore | 1.37737 | 0.00353 |
| HRGMv2_0685_7_78 | vegetarian > omnivore | 1.66947 | 0.00353 |
| HRGMv2_0685_7_79 | vegetarian > omnivore | 1.43974 | 0.00353 |
| HRGMv2_0685_7_79 | vegetarian > vegan | 1.05474 | 0.01033 |
| HRGMv2_0685_7_80 | vegetarian > omnivore | 1.36908 | 0.00353 |
| HRGMv2_0685_7_80 | vegetarian > vegan | 1.02846 | 0.01033 |
| HRGMv2_0685_7_81 | vegetarian > omnivore | 1.71921 | 0.00353 |
| HRGMv2_0685_7_81 | vegetarian > vegan | 1.60076 | 0.01033 |
| HRGMv2_0685_7_82 | vegetarian > omnivore | 1.67773 | 0.00353 |
| HRGMv2_0685_7_83 | vegetarian > omnivore | 1.28728 | 0.00353 |
| HRGMv2_0685_7_83 | vegetarian > vegan | 1.04167 | 0.01033 |
| HRGMv2_0685_7_84 | vegetarian > omnivore | 1.38642 | 0.00353 |
| HRGMv2_0685_7_84 | vegetarian > vegan | 1.12565 | 0.01033 |
| HRGMv2_0685_7_85 | vegetarian > omnivore | 1.34980 | 0.00353 |
| HRGMv2_0685_7_85 | vegetarian > vegan | 1.15017 | 0.01033 |
| HRGMv2_0685_7_86 | vegetarian > omnivore | 1.62476 | 0.00353 |
| HRGMv2_0685_7_86 | vegetarian > vegan | 1.43749 | 0.01033 |