Cluster: HRGMv2_0685_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_00106
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0685_5 | HRGMv2_0685_5_38 | 47336 | 48280 | - | 3.A.1.1.27 |
| TC | HRGMv2_0685_5 | HRGMv2_0685_5_39 | 48277 | 49698 | - | 3.A.1.1.27 |
| pfam | HRGMv2_0685_5 | HRGMv2_0685_5_40 | 49798 | 51063 | - | SBP_bac_1 | SBP_bac_8 |
| CAZyme | HRGMv2_0685_5 | HRGMv2_0685_5_41 | 51247 | 52821 | - | GH77 |
| STP | HRGMv2_0685_5 | HRGMv2_0685_5_42 | 52928 | 53659 | - | Sigma70_r2 | Sigma70_r4 |
| CAZyme | HRGMv2_0685_5 | HRGMv2_0685_5_43 | 53857 | 56046 | - | GH3 |
Gene ID: HRGMv2_0685_5_38
Type: TC
Location: 47336 - 48280 (-)
Type: TC
Location: 47336 - 48280 (-)
Gene ID: HRGMv2_0685_5_39
Type: TC
Location: 48277 - 49698 (-)
Type: TC
Location: 48277 - 49698 (-)
Gene ID: HRGMv2_0685_5_40
Type: pfam
Location: 49798 - 51063 (-)
Type: pfam
Location: 49798 - 51063 (-)
Gene ID: HRGMv2_0685_5_41
Type: CAZyme
Location: 51247 - 52821 (-)
Type: CAZyme
Location: 51247 - 52821 (-)
Gene ID: HRGMv2_0685_5_42
Type: STP
Location: 52928 - 53659 (-)
Type: STP
Location: 52928 - 53659 (-)
Gene ID: HRGMv2_0685_5_43
Type: CAZyme
Location: 53857 - 56046 (-)
Type: CAZyme
Location: 53857 - 56046 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.