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Cluster: HRGMv2_0685_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0685_4 HRGMv2_0685_4_130 159682 160623 - 3.A.1.1.10
TC HRGMv2_0685_4 HRGMv2_0685_4_131 160617 161600 - 3.A.1.1.10
NULL(UNKNOWN) HRGMv2_0685_4 HRGMv2_0685_4_132 161673 163904 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0685_4 HRGMv2_0685_4_133 164017 165354 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0685_4 HRGMv2_0685_4_134 165359 166651 - GH5
TF HRGMv2_0685_4 HRGMv2_0685_4_135 166811 167608 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_0685_4 HRGMv2_0685_4_136 167983 169587 + GH13_31
TC HRGMv2_0685_4 HRGMv2_0685_4_137 169649 170473 + 1.A.23.2.1
NULL(UNKNOWN) HRGMv2_0685_4 HRGMv2_0685_4_138 170652 171128 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0685_4 HRGMv2_0685_4_139 171393 172727 - GH30_3
Gene ID: HRGMv2_0685_4_130
Type: TC
Location: 159682 - 160623 (-)
Gene ID: HRGMv2_0685_4_131
Type: TC
Location: 160617 - 161600 (-)
Gene ID: HRGMv2_0685_4_132
Type:
Location: 161673 - 163904 (-)
Gene ID: HRGMv2_0685_4_133
Type:
Location: 164017 - 165354 (-)
Gene ID: HRGMv2_0685_4_134
Type: CAZyme
Location: 165359 - 166651 (-)
Gene ID: HRGMv2_0685_4_135
Type: TF
Location: 166811 - 167608 (-)
Gene ID: HRGMv2_0685_4_136
Type: CAZyme
Location: 167983 - 169587 (+)
Gene ID: HRGMv2_0685_4_137
Type: TC
Location: 169649 - 170473 (+)
Gene ID: HRGMv2_0685_4_138
Type:
Location: 170652 - 171128 (+)
Gene ID: HRGMv2_0685_4_139
Type: CAZyme
Location: 171393 - 172727 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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