Cluster: HRGMv2_0685_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_00417
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0685_3 | HRGMv2_0685_3_225 | 256045 | 257124 | - | GT4 |
| pfam | HRGMv2_0685_3 | HRGMv2_0685_3_226 | 257259 | 257567 | - | Hexapep |
| CAZyme | HRGMv2_0685_3 | HRGMv2_0685_3_227 | 257750 | 258805 | - | GT4 |
| CAZyme | HRGMv2_0685_3 | HRGMv2_0685_3_228 | 258802 | 260064 | - | GT4 |
| pfam | HRGMv2_0685_3 | HRGMv2_0685_3_229 | 260061 | 260375 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_0685_3 | HRGMv2_0685_3_230 | 260727 | 261515 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_0685_3_225
Type: CAZyme
Location: 256045 - 257124 (-)
Type: CAZyme
Location: 256045 - 257124 (-)
Gene ID: HRGMv2_0685_3_226
Type: pfam
Location: 257259 - 257567 (-)
Type: pfam
Location: 257259 - 257567 (-)
Gene ID: HRGMv2_0685_3_227
Type: CAZyme
Location: 257750 - 258805 (-)
Type: CAZyme
Location: 257750 - 258805 (-)
Gene ID: HRGMv2_0685_3_228
Type: CAZyme
Location: 258802 - 260064 (-)
Type: CAZyme
Location: 258802 - 260064 (-)
Gene ID: HRGMv2_0685_3_229
Type: pfam
Location: 260061 - 260375 (-)
Type: pfam
Location: 260061 - 260375 (-)
Gene ID: HRGMv2_0685_3_230
Type: TC
Location: 260727 - 261515 (-)
Type: TC
Location: 260727 - 261515 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0685_3_230 | vegetarian > omnivore | 3.28474 | 0.00353 |