Cluster: HRGMv2_0685_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_00561
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_107 | 143399 | 144508 | - | CE15 |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_108 | 144517 | 146301 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_109 | 146337 | 150143 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0685_2 | HRGMv2_0685_2_110 | 150256 | 153441 | - | Big_2 |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_111 | 153459 | 155498 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_112 | 155513 | 158551 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0685_2 | HRGMv2_0685_2_113 | 158612 | 159499 | - | 3.A.1.1.18 |
Gene ID: HRGMv2_0685_2_107
Type: CAZyme
Location: 143399 - 144508 (-)
Type: CAZyme
Location: 143399 - 144508 (-)
Gene ID: HRGMv2_0685_2_108
Type: CAZyme
Location: 144517 - 146301 (-)
Type: CAZyme
Location: 144517 - 146301 (-)
Gene ID: HRGMv2_0685_2_109
Type:
Location: 146337 - 150143 (-)
Type:
Location: 146337 - 150143 (-)
Gene ID: HRGMv2_0685_2_110
Type: pfam
Location: 150256 - 153441 (-)
Type: pfam
Location: 150256 - 153441 (-)
Gene ID: HRGMv2_0685_2_111
Type: CAZyme
Location: 153459 - 155498 (-)
Type: CAZyme
Location: 153459 - 155498 (-)
Gene ID: HRGMv2_0685_2_112
Type:
Location: 155513 - 158551 (-)
Type:
Location: 155513 - 158551 (-)
Gene ID: HRGMv2_0685_2_113
Type: TC
Location: 158612 - 159499 (-)
Type: TC
Location: 158612 - 159499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.