Cluster: HRGMv2_0682_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0682
- CGC Family ID: CGCFAM_00268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0682_3 | HRGMv2_0682_3_33 | 41972 | 42577 | - | 4.F.1.1.8 |
| pfam | HRGMv2_0682_3 | HRGMv2_0682_3_34 | 42574 | 43908 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_0682_3 | HRGMv2_0682_3_35 | 43908 | 46835 | - | 3.A.12.1.1 |
| peptidase | HRGMv2_0682_3 | HRGMv2_0682_3_36 | 46945 | 48210 | - | M16.UPB |
| CAZyme | HRGMv2_0682_3 | HRGMv2_0682_3_37 | 48226 | 48945 | - | CE4 |
Gene ID: HRGMv2_0682_3_33
Type: TC
Location: 41972 - 42577 (-)
Type: TC
Location: 41972 - 42577 (-)
Gene ID: HRGMv2_0682_3_34
Type: pfam
Location: 42574 - 43908 (-)
Type: pfam
Location: 42574 - 43908 (-)
Gene ID: HRGMv2_0682_3_35
Type: TC
Location: 43908 - 46835 (-)
Type: TC
Location: 43908 - 46835 (-)
Gene ID: HRGMv2_0682_3_36
Type: peptidase
Location: 46945 - 48210 (-)
Type: peptidase
Location: 46945 - 48210 (-)
Gene ID: HRGMv2_0682_3_37
Type: CAZyme
Location: 48226 - 48945 (-)
Type: CAZyme
Location: 48226 - 48945 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-314
Genus
CAG-314
Species
CAG-314 sp000437915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0682_3_34 | omnivore > vegetarian | 22.41972 | 0.01749 |
| HRGMv2_0682_3_35 | omnivore > vegetarian | 23.14997 | 0.01749 |
| HRGMv2_0682_3_37 | omnivore > vegetarian | 23.05865 | 0.01749 |