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Cluster: HRGMv2_0677_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0677_3 HRGMv2_0677_3_28 24776 26113 - GH4
pfam HRGMv2_0677_3 HRGMv2_0677_3_29 26294 27358 - ADH_zinc_N | ADH_N
TC HRGMv2_0677_3 HRGMv2_0677_3_30 27376 28356 - 3.A.1.2.13
TC HRGMv2_0677_3 HRGMv2_0677_3_31 28358 29977 - 3.A.1.2.20
TC HRGMv2_0677_3 HRGMv2_0677_3_32 29916 31064 - 3.A.1.2.19
TC HRGMv2_0677_3 HRGMv2_0677_3_33 31679 32986 + 3.A.1.10.2
TF HRGMv2_0677_3 HRGMv2_0677_3_34 32997 34607 + HTH_AraC | HTH_AraC
TC HRGMv2_0677_3 HRGMv2_0677_3_35 34619 35992 + 8.A.59.2.1
Gene ID: HRGMv2_0677_3_28
Type: CAZyme
Location: 24776 - 26113 (-)
Gene ID: HRGMv2_0677_3_29
Type: pfam
Location: 26294 - 27358 (-)
Gene ID: HRGMv2_0677_3_30
Type: TC
Location: 27376 - 28356 (-)
Gene ID: HRGMv2_0677_3_31
Type: TC
Location: 28358 - 29977 (-)
Gene ID: HRGMv2_0677_3_32
Type: TC
Location: 29916 - 31064 (-)
Gene ID: HRGMv2_0677_3_33
Type: TC
Location: 31679 - 32986 (+)
Gene ID: HRGMv2_0677_3_34
Type: TF
Location: 32997 - 34607 (+)
Gene ID: HRGMv2_0677_3_35
Type: TC
Location: 34619 - 35992 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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