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Cluster: HRGMv2_0677_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0677_2 HRGMv2_0677_2_135 141439 142317 - 3.A.1.15.14
CAZyme HRGMv2_0677_2 HRGMv2_0677_2_136 142540 144186 + CE4
CAZyme HRGMv2_0677_2 HRGMv2_0677_2_137 144331 145317 + CE4
pfam HRGMv2_0677_2 HRGMv2_0677_2_138 145501 149115 - Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Beta_helix | Beta_helix | Flg_new_2
TF HRGMv2_0677_2 HRGMv2_0677_2_139 149203 149610 - Rrf2
CAZyme HRGMv2_0677_2 HRGMv2_0677_2_140 150042 151148 - GH109
TC HRGMv2_0677_2 HRGMv2_0677_2_141 151549 153036 + 3.A.1.2.20
TC HRGMv2_0677_2 HRGMv2_0677_2_142 153033 154106 + 3.A.1.2.1
TC HRGMv2_0677_2 HRGMv2_0677_2_143 154165 155349 + 3.A.1.2.25
Gene ID: HRGMv2_0677_2_135
Type: TC
Location: 141439 - 142317 (-)
Gene ID: HRGMv2_0677_2_136
Type: CAZyme
Location: 142540 - 144186 (+)
Gene ID: HRGMv2_0677_2_137
Type: CAZyme
Location: 144331 - 145317 (+)
Gene ID: HRGMv2_0677_2_138
Type: pfam
Location: 145501 - 149115 (-)
Gene ID: HRGMv2_0677_2_139
Type: TF
Location: 149203 - 149610 (-)
Gene ID: HRGMv2_0677_2_140
Type: CAZyme
Location: 150042 - 151148 (-)
Gene ID: HRGMv2_0677_2_141
Type: TC
Location: 151549 - 153036 (+)
Gene ID: HRGMv2_0677_2_142
Type: TC
Location: 153033 - 154106 (+)
Gene ID: HRGMv2_0677_2_143
Type: TC
Location: 154165 - 155349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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