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Cluster: HRGMv2_0677_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0677_2 HRGMv2_0677_2_3 2695 4467 - 9.B.33.1.1
NULL(UNKNOWN) HRGMv2_0677_2 HRGMv2_0677_2_4 4777 5250 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0677_2 HRGMv2_0677_2_5 5335 5775 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0677_2 HRGMv2_0677_2_6 5908 6912 + 3.A.1.2.13
TC HRGMv2_0677_2 HRGMv2_0677_2_7 6925 8412 + 3.A.1.2.3
TC HRGMv2_0677_2 HRGMv2_0677_2_8 8462 9520 + 3.A.1.2.11
NULL(UNKNOWN) HRGMv2_0677_2 HRGMv2_0677_2_9 9557 10942 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0677_2 HRGMv2_0677_2_10 10964 11905 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0677_2 HRGMv2_0677_2_11 11919 13046 + CE9
Gene ID: HRGMv2_0677_2_3
Type: TC
Location: 2695 - 4467 (-)
Gene ID: HRGMv2_0677_2_4
Type:
Location: 4777 - 5250 (+)
Gene ID: HRGMv2_0677_2_5
Type:
Location: 5335 - 5775 (+)
Gene ID: HRGMv2_0677_2_6
Type: TC
Location: 5908 - 6912 (+)
Gene ID: HRGMv2_0677_2_7
Type: TC
Location: 6925 - 8412 (+)
Gene ID: HRGMv2_0677_2_8
Type: TC
Location: 8462 - 9520 (+)
Gene ID: HRGMv2_0677_2_9
Type:
Location: 9557 - 10942 (+)
Gene ID: HRGMv2_0677_2_10
Type:
Location: 10964 - 11905 (+)
Gene ID: HRGMv2_0677_2_11
Type: CAZyme
Location: 11919 - 13046 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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