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Cluster: HRGMv2_0677_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0677_24 HRGMv2_0677_24_16 15830 16987 - 2.A.1.2.90
pfam HRGMv2_0677_24 HRGMv2_0677_24_17 17119 17379 - PP-binding
TC HRGMv2_0677_24 HRGMv2_0677_24_18 17408 19075 - 4.C.1.1.4
pfam HRGMv2_0677_24 HRGMv2_0677_24_19 19206 19886 - Methyltransf_2 | Ubie_methyltran | CMAS | MTS | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme HRGMv2_0677_24 HRGMv2_0677_24_20 19979 21049 - GT4
STP HRGMv2_0677_24 HRGMv2_0677_24_21 21074 22306 - Aminotran_1_2
TC HRGMv2_0677_24 HRGMv2_0677_24_22 22390 23805 - 2.A.36.6.3
Gene ID: HRGMv2_0677_24_16
Type: TC
Location: 15830 - 16987 (-)
Gene ID: HRGMv2_0677_24_17
Type: pfam
Location: 17119 - 17379 (-)
Gene ID: HRGMv2_0677_24_18
Type: TC
Location: 17408 - 19075 (-)
Gene ID: HRGMv2_0677_24_19
Type: pfam
Location: 19206 - 19886 (-)
Gene ID: HRGMv2_0677_24_20
Type: CAZyme
Location: 19979 - 21049 (-)
Gene ID: HRGMv2_0677_24_21
Type: STP
Location: 21074 - 22306 (-)
Gene ID: HRGMv2_0677_24_22
Type: TC
Location: 22390 - 23805 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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