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Cluster: HRGMv2_0677_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0677_15 HRGMv2_0677_15_20 16689 17384 + GH73
TC HRGMv2_0677_15 HRGMv2_0677_15_21 17683 20337 + 3.A.3.2.21
TC HRGMv2_0677_15 HRGMv2_0677_15_22 20575 22047 + 9.B.34.1.4
pfam HRGMv2_0677_15 HRGMv2_0677_15_23 22079 22705 - CpXC
pfam HRGMv2_0677_15 HRGMv2_0677_15_24 22873 23358 - tRNA_edit
TC HRGMv2_0677_15 HRGMv2_0677_15_25 23491 24162 - 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_0677_15 HRGMv2_0677_15_26 24166 24792 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0677_15 HRGMv2_0677_15_27 24819 26045 - 3.A.1.122.2
Gene ID: HRGMv2_0677_15_20
Type: CAZyme
Location: 16689 - 17384 (+)
Gene ID: HRGMv2_0677_15_21
Type: TC
Location: 17683 - 20337 (+)
Gene ID: HRGMv2_0677_15_22
Type: TC
Location: 20575 - 22047 (+)
Gene ID: HRGMv2_0677_15_23
Type: pfam
Location: 22079 - 22705 (-)
Gene ID: HRGMv2_0677_15_24
Type: pfam
Location: 22873 - 23358 (-)
Gene ID: HRGMv2_0677_15_25
Type: TC
Location: 23491 - 24162 (-)
Gene ID: HRGMv2_0677_15_26
Type:
Location: 24166 - 24792 (-)
Gene ID: HRGMv2_0677_15_27
Type: TC
Location: 24819 - 26045 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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