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Cluster: HRGMv2_0677_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0677_1 HRGMv2_0677_1_6 3868 4893 - GH179
STP HRGMv2_0677_1 HRGMv2_0677_1_7 4999 6081 - Peripla_BP_1
TC HRGMv2_0677_1 HRGMv2_0677_1_8 6232 7230 - 3.A.1.2.13
TC HRGMv2_0677_1 HRGMv2_0677_1_9 7230 8213 - 3.A.1.2.1
TC HRGMv2_0677_1 HRGMv2_0677_1_10 8250 9746 - 3.A.1.2.20
Gene ID: HRGMv2_0677_1_6
Type: CAZyme
Location: 3868 - 4893 (-)
Gene ID: HRGMv2_0677_1_7
Type: STP
Location: 4999 - 6081 (-)
Gene ID: HRGMv2_0677_1_8
Type: TC
Location: 6232 - 7230 (-)
Gene ID: HRGMv2_0677_1_9
Type: TC
Location: 7230 - 8213 (-)
Gene ID: HRGMv2_0677_1_10
Type: TC
Location: 8250 - 9746 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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