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Cluster: HRGMv2_0674_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_13 HRGMv2_0674_13_23 27169 28203 - 3.A.1.20.1
TC HRGMv2_0674_13 HRGMv2_0674_13_24 28215 29000 - 3.A.1.11.6
TC HRGMv2_0674_13 HRGMv2_0674_13_25 28997 29830 - 3.A.1.11.4
TC HRGMv2_0674_13 HRGMv2_0674_13_26 30360 31691 - 2.A.66.1.37
TF HRGMv2_0674_13 HRGMv2_0674_13_27 31681 32145 - MarR
CAZyme HRGMv2_0674_13 HRGMv2_0674_13_28 32682 34043 + GH32
Gene ID: HRGMv2_0674_13_23
Type: TC
Location: 27169 - 28203 (-)
Gene ID: HRGMv2_0674_13_24
Type: TC
Location: 28215 - 29000 (-)
Gene ID: HRGMv2_0674_13_25
Type: TC
Location: 28997 - 29830 (-)
Gene ID: HRGMv2_0674_13_26
Type: TC
Location: 30360 - 31691 (-)
Gene ID: HRGMv2_0674_13_27
Type: TF
Location: 31681 - 32145 (-)
Gene ID: HRGMv2_0674_13_28
Type: CAZyme
Location: 32682 - 34043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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