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Cluster: HRGMv2_0674_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0674_11 HRGMv2_0674_11_8 9324 10760 - 3.A.1.1.29
TC HRGMv2_0674_11 HRGMv2_0674_11_9 10791 11666 - 3.A.1.1.10
TC HRGMv2_0674_11 HRGMv2_0674_11_10 11669 12619 - 3.A.1.1.10
TF HRGMv2_0674_11 HRGMv2_0674_11_11 12812 14389 + HTH_AraC | HTH_AraC
TC HRGMv2_0674_11 HRGMv2_0674_11_12 14386 16113 + 8.A.59.2.1
pfam HRGMv2_0674_11 HRGMv2_0674_11_13 16435 17847 - Resolvase | Recombinase | Zn_ribbon_recom
pfam HRGMv2_0674_11 HRGMv2_0674_11_14 17978 18313 - PRA-PH
CAZyme HRGMv2_0674_11 HRGMv2_0674_11_15 18338 19402 - GH172
pfam HRGMv2_0674_11 HRGMv2_0674_11_16 19461 20561 - DUF4185
TC HRGMv2_0674_11 HRGMv2_0674_11_17 20577 21425 - 3.A.1.1.20
TC HRGMv2_0674_11 HRGMv2_0674_11_18 21441 22376 - 3.A.1.1.20
Gene ID: HRGMv2_0674_11_8
Type: TC
Location: 9324 - 10760 (-)
Gene ID: HRGMv2_0674_11_9
Type: TC
Location: 10791 - 11666 (-)
Gene ID: HRGMv2_0674_11_10
Type: TC
Location: 11669 - 12619 (-)
Gene ID: HRGMv2_0674_11_11
Type: TF
Location: 12812 - 14389 (+)
Gene ID: HRGMv2_0674_11_12
Type: TC
Location: 14386 - 16113 (+)
Gene ID: HRGMv2_0674_11_13
Type: pfam
Location: 16435 - 17847 (-)
Gene ID: HRGMv2_0674_11_14
Type: pfam
Location: 17978 - 18313 (-)
Gene ID: HRGMv2_0674_11_15
Type: CAZyme
Location: 18338 - 19402 (-)
Gene ID: HRGMv2_0674_11_16
Type: pfam
Location: 19461 - 20561 (-)
Gene ID: HRGMv2_0674_11_17
Type: TC
Location: 20577 - 21425 (-)
Gene ID: HRGMv2_0674_11_18
Type: TC
Location: 21441 - 22376 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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